Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04117 ATGGTTACGGAAGGACCAGCCATCGAAGCTCTCGGTTCTCTCTTCAAAATCACACAAGTCTTTCTATGGGATGATGGTTCTCCGGGTTCTCTCCCACTAGAAGGCTCTAAATCGGCTGAAGTTCATGGCAATGGCAATGACAATGACAATGAAAATGACAGCTCGAACCTTGTTCCTGATTGGAGCGATCTTCTCGAACCTGAGGATTTGGAACTTAACAAACAGATGAGTGAATTGGGTCTCCCTCTTTCCTTTCACACAACCAAAGAGAAAAGTGGACCAGGGAAAGGTAAAAAAAAGGGCTCACGTTCAAAGCTTCGGCGTACTTGTCATACTGCAGAGGAGGTTGTATCTGCTGCTGAATTTCATGATAAGGCAAGCAGTTCTGTATCTTGTGTATCAATGCTGGGCCAAAGTGAATCATCTTACTGCAGTGTAGTGGAGATTGATATGACTCGATGTGCCTCTGTTGAAGGAGATAATTCAGCATGCTGCACTGCAGAGAAACATGATGAAGATATAATTGAGGCAGCAACTAATGAAACCCCGGATAGTGACTCTCTAATCAACAATGCATGTGTTGATTTAAAAATTCCACCAGCTTTGGCCACCGGAGTCTCTGCTGGAAGCCACTTGACAAGTCCCAGCGCCAGTTATTGTGGGATAAAACACGATGAAAGCTTAATTGGCGTTGAATGTTTAGAAATTTCACCAATTGTTAGCAAAGAGACGACCGAGAGTGAGACCATTTGCAATGATGATGATGCTGGCACTTGGCATCCACCAACTAATGAATCAGAATTGGTTACCATGAGTATAGAAGGGACTGGATGTGGCCAAATCAACATGTCAAATTATCTTGGCGAACTCGGAGATTGGATGGTGTTTTGGGATACTTTCTACATGAGAAAATACTTCTATAATACCACAACACAGACTTCTACATGGGACCCACCCCCAGGGATGGAGCATCTAGCAATTGTTGAGTCCATTGAATTAGACGATGGCAGGGCTTTAAAGGAAGCAGAGGAGTGCAAAACACAAAATAACACTAAAGCACCCCATGAAACCTTGATTGAAGAGGAGTCAGAAGGAAAGCAACATGATGAGTATTCAACTAGTATCGGAGTTGGTGGCAAGTTGGTTTCCGATCTCACTACACATAGCGAGGAGCAATTGGTGGATCATTCTGATGAGTATCTTGAGAGAAGTAGTTCCAACGGTGGAGTTTCATGCTCCTCAGTATCAAATGCTATGGAGCACACAATTAGTTCCAATGAAGGAAACATACAGGCAGCATCAGAGGTTAATTATAAACACTTAGAAAACATGGTTATTGATACACCTGAATATATCGAGTTTGATCCATCCACGTCAAAAGAGGGCAATAAAGTGAAAAGGAGACATAGGCAGAGAAGAAAATCCTATAGTGAAACTGAAGTTCAATTTCAAGAAATGCCTGAAGAGTATCCTGCTGCAATTGGCAAATATTGGTGGCAGAGATATATTTTGTTCTCTAGATTTGATGATGGTGTAAAAATGGATGAGGAAGGATGGTTTTCTGTCACTCCAGAGCCTATTGCTCGACATCAAGCAGAGCGTTGTGCTAGTGGCATTATAATTGACTGTTTTGTTGGTGTTGGTGGGAATGCTATCCAATTTGTGAAGAGTTGCAATCATGTGATAGCGATTGATATTGATCCGCTGAAGATTGATTATGCTAGGCATAATGCTGCCATTTATGGGGTGGATGATCAAATTAACTTCATAATCGGTGACTTCTTTGTCTTGGCACCTAAGTTAAAGGCCGATACGGTTTTCTTGTCTCCACCTTGGGGAGGACCTGATTATTTAAAGGTTGCGACTTATGACATGAAGACAATGCTTAAACCGCATGATGGATTTACTCTGTTCAATCTTGCAAAGGAGATTGCTTCCAAAGTTGTAATGTTCCTTCCAAGAAATGTAGATTTCAATCAATTGGCAGAGTTATCTCTATCTACCAGTCCACCATGGTCACTAGAGGTGGAGAAAGTTCACTTAAATGGAAAACTGAAGGCGATCACTGCATATTTCAGCGACACAAGAGTTGGAGGTTGCTCGATGAATAAACACATTCGCTTCTGCTCAAGCTCAAGTGATGAAGAATCAGGATCCCTGCAATGA 2166 0.4206 MVTEGPAIEALGSLFKITQVFLWDDGSPGSLPLEGSKSAEVHGNGNDNDNENDSSNLVPDWSDLLEPEDLELNKQMSELGLPLSFHTTKEKSGPGKGKKKGSRSKLRRTCHTAEEVVSAAEFHDKASSSVSCVSMLGQSESSYCSVVEIDMTRCASVEGDNSACCTAEKHDEDIIEAATNETPDSDSLINNACVDLKIPPALATGVSAGSHLTSPSASYCGIKHDESLIGVECLEISPIVSKETTESETICNDDDAGTWHPPTNESELVTMSIEGTGCGQINMSNYLGELGDWMVFWDTFYMRKYFYNTTTQTSTWDPPPGMEHLAIVESIELDDGRALKEAEECKTQNNTKAPHETLIEEESEGKQHDEYSTSIGVGGKLVSDLTTHSEEQLVDHSDEYLERSSSNGGVSCSSVSNAMEHTISSNEGNIQAASEVNYKHLENMVIDTPEYIEFDPSTSKEGNKVKRRHRQRRKSYSETEVQFQEMPEEYPAAIGKYWWQRYILFSRFDDGVKMDEEGWFSVTPEPIARHQAERCASGIIIDCFVGVGGNAIQFVKSCNHVIAIDIDPLKIDYARHNAAIYGVDDQINFIIGDFFVLAPKLKADTVFLSPPWGGPDYLKVATYDMKTMLKPHDGFTLFNLAKEIASKVVMFLPRNVDFNQLAELSLSTSPPWSLEVEKVHLNGKLKAITAYFSDTRVGGCSMNKHIRFCSSSSDEESGSLQ 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04117 721 CDD AdoMet_MTases 540 620 - -
Arst6g04117 721 Gene3D Vaccinia Virus protein VP39 488 697 IPR029063 -
Arst6g04117 721 SMART ww_5 288 321 IPR001202 GO:0005515
Arst6g04117 721 Gene3D - 284 338 - -
Arst6g04117 721 MobiDBLite consensus disorder prediction 41 59 - -
Arst6g04117 721 SUPERFAMILY WW domain 283 320 IPR036020 GO:0005515
Arst6g04117 721 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 506 629 IPR029063 -
Arst6g04117 721 ProSitePatterns WW/rsp5/WWP domain signature. 293 319 IPR001202 GO:0005515
Arst6g04117 721 CDD WW 291 321 IPR001202 GO:0005515
Arst6g04117 721 Pfam RNA cap guanine-N2 methyltransferase 539 693 IPR019012 GO:0001510|GO:0008168|GO:0009452
Arst6g04117 721 ProSiteProfiles WW/rsp5/WWP domain profile. 293 321 IPR001202 GO:0005515
Arst6g04117 721 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 489 696 - -
Arst6g04117 721 MobiDBLite consensus disorder prediction 32 61 - -
Arst6g04117 721 PANTHER S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED 66 701 - -
Arst6g04117 721 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04117 Arst-Chr6 109271795 109279920 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04117 6 109271795 109279920 Arst6g04117 6 109271795 109279920 ECH