Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04101 ATGGTTTTCCCTCAGCACCAGTTCCAACGGCACTACCAAACCCACCACCACCAGCAGCAACAACAACCACAAACTAAATCTTTCAGAAACCTGCAAGCAATGGAAGCTCATATGCCACCTCAGGTTCCCTTTTACAATCCCACTGATTTGCAAGATCAGTCCCAACATCCACCATACATTCCTCCATTCCATGTTGTTGGGTTTGCTCCGGGTCCAGTTCCTCCTGCCGATGGTAGTGACGGTGGTGTTGATTTGCAATGGAACTACGGTTTCGAACCTGAGAGGAAGAGACTAAAAGAACAGGATTTCTTGGAGAACAATTCTCAGGTATCTTCTGTAGATTTCCTGCAGCCACTATCGGTGTCCACTGGATTGGGCTTGTCACTTGACAATCCCCGCTTGGTTTCAACCGGAGACTCTGCTCTGTTGTCACTCATTGGAGATGACATTAAAACTTTTCTTGTATATGAAGATGAGGCACTAATTAATCATCTTCTCTAATAGGGGGAACAAATGAGGCAATCAATTTTAGATAAGGTTCAGGCTTCACAGCTTCAGAGCGTTTTGGTTATCGAAGACAGGGTCCTTCAGAAACTCCGCGAGAAGGAAGCCGAGGTAGAAAGCATTAACCGGAGGAACATGGAGCTGGAAGACCAAATGGAGCAATTAACTATGGAAGCAGGTGTGTGGCAGCAAAGAGCCAAGCACAACGAGAGCATGATTGCTGCTCTCAAGTTCAACCTTCAGCAAGCGTATGTCCAGAGCCGAGATAGTAAGGAAGGATGTGGCGACAGTGAGGTGGACGACACGGCTTCTTGCTGCAACGGCCGTTCCATCGATTTCCATCTTCTCTCAAAGGAGAACAATGGTATGAGAGAGATGATGACATGTAAGGCTTGTAGAGTCAATGAAGTTAACATGCTTTTGTTACCTTGTAAGCATCTTTGCCTTTGTAAAGACTGTGAAAGTAAGCTTAGTTTTTGTCCTTTATGTCAATCCTCTAAATTTATTGGTATGCAGGTCTATTTGTAA 1032 0.4506 MVFPQHQFQRHYQTHHHQQQQQPQTKSFRNLQAMEAHMPPQVPFYNPTDLQDQSQHPPYIPPFHVVGFAPGPVPPADGSDGGVDLQWNYGFEPERKRLKEQDFLENNSQVSSVDFLQPLSVSTGLGLSLDNPRLVSTGDSALLSLIGDDIKTFLVYEDEALINHLLXXGEQMRQSILDKVQASQLQSVLVIEDRVLQKLREKEAEVESINRRNMELEDQMEQLTMEAGVWQQRAKHNESMIAALKFNLQQAYVQSRDSKEGCGDSEVDDTASCCNGRSIDFHLLSKENNGMREMMTCKACRVNEVNMLLLPCKHLCLCKDCESKLSFCPLCQSSKFIGMQVYL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04101 343 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 282 343 IPR013083 -
Arst6g04101 343 ProSiteProfiles Zinc finger RING-type profile. 297 332 IPR001841 -
Arst6g04101 343 MobiDBLite consensus disorder prediction 14 31 - -
Arst6g04101 343 FunFam Baculoviral IAP repeat containing 7 306 342 - -
Arst6g04101 343 Coils Coil 192 233 - -
Arst6g04101 343 MobiDBLite consensus disorder prediction 1 63 - -
Arst6g04101 343 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 92 341 IPR017066 -
Arst6g04101 343 CDD mRING-HC-C3HC5_CGRF1-like 296 331 - -
Arst6g04101 343 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 278 343 - -
Arst6g04101 343 PIRSF SBP1_RNase_bind 2 343 IPR017066 -
Arst6g04101 343 Pfam Zinc finger, C3HC4 type (RING finger) 295 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04101 Arst-Chr6 109155134 109157369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04101 289 333 Miscellaneous Gene Families AT4G39050 42.222 6.56e-07 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04101 6 109155134 109157369 Arst6g04101 6 109155134 109157369 ECH