Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04096 ATGGAACAAGAAGAAGAACCACAACAAAATGAGCCACCTCACTCTCACTCTCAATCTCGGTGCGTGACGCTACCTCCCGGTTGCCGGTTCCATCCTTCGGAGGAGCTTCTATTGAGTTACTACCTCACCAACAAAAATGGCACGGGGAACTGGAATGGTAACGGTGGTTTGGGATTCGATGGTTCTGATTTGATTCGGGAGCTGGATTTTTACGATTACGATCCTTTTGAACTTCCGGATTTTGCGTGCTTTGCGTACGGCTACGGCGGGAGGAGGAGGCACTGGTACTGTTTCACCACCGTTAGGGTTTCGAGGGGAGAGAGGTGGAAGAGGAAGAGGAAGGTTAAGAGTGGGTTCTGGTTGAAGAGGGGAAGGGTTTCGAATGTTAACGGTGTTGGGGAGAACGTGGTTTTGGGAACGAGGACAAGGTTCGTTTTCTATATGGGTGATTCGGCGAAGAACGGTGCCAGGACGGATTGGGTTTTGTATGAATACGCATTGGTTGATCATGTTATGGCCTCTTTTGTTCTTTGCCGGGTATTTAGTAAGCCTCGTTATAAGAATAGTGCATCAGACATCGGCCTGAGTTGTTGTGCAGAAGAGAGTGTATCAGCAGTGCGCCATATTGGTATTCAGCATGATGAACATGTTAAATTGGATGCCGTTGAAGCTAAAGTATGTGATGATATCTCCATTGACCACAACAATGAAATATGTGCTGGTGGAAACAGCGATAATCAAGTTAAGAATGCACATGACATAGATGCTTTACGATGTTTGGCGGCTCCTCAGGGCAGTCAGCAGCTATCAATTGCAAACTTCTACGTCAGCAATAATCTGAAAAGTGTAGTCAGAAATGGGGCTATCAGTGTCGGGGAGTCATTTAGCGTTTCTATCTTCTTTACAATTACCTTCCCCCTTTTTAGATTTGCTAGATTTGAGAACTCATTCATATGA 957 0.4566 MEQEEEPQQNEPPHSHSQSRCVTLPPGCRFHPSEELLLSYYLTNKNGTGNWNGNGGLGFDGSDLIRELDFYDYDPFELPDFACFAYGYGGRRRHWYCFTTVRVSRGERWKRKRKVKSGFWLKRGRVSNVNGVGENVVLGTRTRFVFYMGDSAKNGARTDWVLYEYALVDHVMASFVLCRVFSKPRYKNSASDIGLSCCAEESVSAVRHIGIQHDEHVKLDAVEAKVCDDISIDHNNEICAGGNSDNQVKNAHDIDALRCLAAPQGSQQLSIANFYVSNNLKSVVRNGAISVGESFSVSIFFTITFPLFRFARFENSFI 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04096 318 MobiDBLite consensus disorder prediction 1 21 - -
Arst6g04096 318 Pfam No apical meristem (NAM) protein 25 167 IPR003441 GO:0003677|GO:0006355
Arst6g04096 318 SUPERFAMILY NAC domain 20 183 IPR036093 GO:0003677|GO:0006355
Arst6g04096 318 Gene3D NAC domain 33 187 IPR036093 GO:0003677|GO:0006355
Arst6g04096 318 ProSiteProfiles NAC domain profile. 24 183 IPR003441 GO:0003677|GO:0006355
Arst6g04096 318 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 24 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04096 Arst-Chr6 109113806 109117279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04096 23 184 NAC Transcription Factor Family AT1G71930 31.737 9.97e-21 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst6g04096 NAM 2.1e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04096 6 109113806 109117279 Arst6g04096 6 109113806 109117279 ECH