Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04091 ATGAAGTCTCTCACAGTCACAGCCAGTGTTTTGAACCCCACAAATCAAACACCAATCAACAAACTCCACTTCTTCCACTCTCACTCTCTCTCATTCTCATTCTTCTTCCCACACACATCATCAAACCTGAAATGCCACCATCAAAAGCGAATCATCACAGCATGCTCTTCTTCTTCTTCTTCTTCTTCGATCGAAATCGACATGGTGAAGAACAACCAAGGAATCTACACCCCTAAGCACCCCAAAGTAGTCGTCCTCTGGGACCTCGACAACAAGCCCCCACGAGGACCCCCATACGACGCCGCACGCTCCCTCACGCGCCTCGCAACTCACCTCGGCCACGTCGTCGACATCTCCGCCTACGCCAATCGCCACACATTCATCCACCTCCCGCAGTGGGTCCTACAGGATCGCCGCCAGAGAAAGCACCTCGACGTGCTGGAACGGAAGGGACTGGTGGTGCCGTCGGAGCCCTACAGGTGTTCCGTCTGCGGGAGAAAGTGTCGCACCAATCTGGATCTGAAGAAGCATTTCAGGCAGTTGCATGAACGAGAGAGGCAGAAGAAGCTTAATCGGATGAGGTCCTTGAAAGGGAAGAAACGGCAGCGTTTTAAAGAGAGGTTTATTCAGGGGAATGAAAAGTATAATGAGGCTGCTAGGTCTCTCATCAGGCCCAAGATTGGTTATGGGCTAGCTTCAGAGCTGAGGAGGGCTGGGGTATATGTGAAGACTGTGGAGGATAAGCCTCAGGCTGCAGATTGGGCATTGAAGAGGCAGATGCAGCACTCAATAACCAGGGGGATTGATTGGCTGGTTTTGGTCTCAGATGATTCGGATTTCGCAGAGATGTTGAGGAGAGCAAAAGAGAGGGATTTGGGGACAGTGGTGGTTGGGGATTGGGATAGGGCACTGGGGAGGCACGCCGATTTGTGGTTTCCCTGGATTGATGTTGAGAATGGGAATGTCTCGGAGAAGGATCTGGTGATCGAGAAGAACAGGAGTAGGGCTCGAAGTGACGGTTTTGTCGTGGAAGAAGATGATGATGGGTTTTTTTCATTGTCGAGGTTTGACAGTGGTGGTGGTCATGGGAGTAGTGATTTGGATGAGCTTGTAGATGAACTTGCAGCAGTGAGGACTGATTTTACTGCGGCAATTTCAGATGAGGATGAAGACGATTATATGTTGGGGAGTAGTGAGGATGAGTACATAGAAGATTACGATGAAGACAGTGATCAAGAAGATGATGGGTTCTATTGA 1257 0.5004 MKSLTVTASVLNPTNQTPINKLHFFHSHSLSFSFFFPHTSSNLKCHHQKRIITACSSSSSSSSIEIDMVKNNQGIYTPKHPKVVVLWDLDNKPPRGPPYDAARSLTRLATHLGHVVDISAYANRHTFIHLPQWVLQDRRQRKHLDVLERKGLVVPSEPYRCSVCGRKCRTNLDLKKHFRQLHERERQKKLNRMRSLKGKKRQRFKERFIQGNEKYNEAARSLIRPKIGYGLASELRRAGVYVKTVEDKPQAADWALKRQMQHSITRGIDWLVLVSDDSDFAEMLRRAKERDLGTVVVGDWDRALGRHADLWFPWIDVENGNVSEKDLVIEKNRSRARSDGFVVEEDDDGFFSLSRFDSGGGHGSSDLDELVDELAAVRTDFTAAISDEDEDDYMLGSSEDEYIEDYDEDSDQEDDGFY 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04091 418 CDD PIN_LabA-like 169 299 - -
Arst6g04091 418 Gene3D - 76 316 - -
Arst6g04091 418 ProSiteProfiles Zinc finger C2H2 type domain profile. 159 187 IPR013087 -
Arst6g04091 418 ProSitePatterns Zinc finger C2H2 type domain signature. 161 182 IPR013087 -
Arst6g04091 418 Coils Coil 179 199 - -
Arst6g04091 418 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 39 363 - -
Arst6g04091 418 MobiDBLite consensus disorder prediction 388 418 - -
Arst6g04091 418 SMART c2h2final6 159 182 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04091 Arst-Chr6 109074969 109077516 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04091 20 354 C2H2 Transcription Factor Family AT5G52010 66.276 1.42e-159 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst6g04091 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04091 6 109074969 109077516 Arst6g04091 6 109074969 109077516 ECH