Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04072 ATGGCTTCATCCTTCACCATCCTCCTCTTCTTCTTCACTCTCTTCACTCTTTCATATGCATCAGACATGTCCATAATCTCGTACGACAAAACCCACTCCAACACATGGAGAACCGATGAGGAAGTCATGGCTATGTACGAGGAATGGCTTGTGAAGCATGGAAAGAAACCAAGTAACGGTCTCTTGAGTGGTGAGAGCAAGAATCGGTTCGAGATCTTTAAGGATAACCTCCGGTTCATTGATGAACAGAACAGTTTACCGAACCGGACTTTCCAGCTCGGTCTGAACCGGTTCGCCGATCTGACCAACGAGGAGTACAGGGCTAAGTATTTGGGTACCAGGATGGATCCTAACCGTCGGATGATGAAGGCTAAGACCAGGAGCAACCGATACGCGCCACGTGTCGGGGACAAGTTGCCGGAGAGTGTTGATTGGAGGAAGGAAGGTGCTGTTGTTGGAGTCAAAGACCAAGGAGGATGTGGGAGTTGTTGGGCATTCTCAACAATTGCTGCAGTGGAAGGAATAAACAAGATCGTAACAGGGGATCTGATTTCACTGTCAGAGCAAGAACTTGTGGACTGTGATACATCATACAATGAAGGGTGTAATGGTGGACTCATGGACTATGCCTTTGAGTTCATCATCAACAATGGTGGCATTGACTCTGAAGCCGATTACCCTTACACTGGCTATGATGGCATATGTGACCAAATCAGGAAAAATGCTAAGGTTGTGAAGATTGATAGCTATGAAGATGTTCCTGCCTATGATGAATTGGCATTGAAAAAGGCCGTTGCCAATCAGCCCGTGGCAGTTGCCATTGAAGGAGGTGGCAGGGAATTCCAGTTATATGTATCTGGTGTATTCACAGGAAAATGTGGAACAGCATTGGACCATGGAGTTGCTGCTGTAGGGTATGGGTCAGAAGGTGGGCATGAGTATTGGATTGTGAGGAACTCATGGGGAGCTAGCTGGGGAGAGGACGGTTACATCCGAATGGAGCGGAATCTTGGTAACAGCAGAGCAGGCAAGTGTGGAATCGCCATCGAGCCTTCTTACCCTATTAAGAATGGCCCCAATCCTCCTAACCCCGGACCATCTCCACCGTCGCCTGTGAGGCCGCCGTCGGTGTGTGATAACTACTTCAGCTGCCAATCTGGAAACACATGCTGCTGCCTTTTCCAGTTTGGAAATGCATGCTTTGAATGGGGATGCTGCCCTCTTGAAGGTGCTACCTGCTGTGATGATCACTACAGCTGCTGTCCTGCCGACTACCCCGTTTGTGACACTTACAGAGGTCTTTGCCTCAAGAACAAGAACAACCCATTCGGAGTGAAGGCGTTGAAGAGAACTGCAGCTAAACCTCACTGGGCCTTCAATGGTGTGAGCAGTGCTTAG 1398 0.4886 MASSFTILLFFFTLFTLSYASDMSIISYDKTHSNTWRTDEEVMAMYEEWLVKHGKKPSNGLLSGESKNRFEIFKDNLRFIDEQNSLPNRTFQLGLNRFADLTNEEYRAKYLGTRMDPNRRMMKAKTRSNRYAPRVGDKLPESVDWRKEGAVVGVKDQGGCGSCWAFSTIAAVEGINKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDSEADYPYTGYDGICDQIRKNAKVVKIDSYEDVPAYDELALKKAVANQPVAVAIEGGGREFQLYVSGVFTGKCGTALDHGVAAVGYGSEGGHEYWIVRNSWGASWGEDGYIRMERNLGNSRAGKCGIAIEPSYPIKNGPNPPNPGPSPPSPVRPPSVCDNYFSCQSGNTCCCLFQFGNACFEWGCCPLEGATCCDDHYSCCPADYPVCDTYRGLCLKNKNNPFGVKALKRTAAKPHWAFNGVSSA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04072 465 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 157 168 IPR000169 -
Arst6g04072 465 SMART Inhibitor_I29_2 46 106 IPR013201 -
Arst6g04072 465 Pfam Papain family cysteine protease 139 355 IPR000668 GO:0006508|GO:0008234
Arst6g04072 465 PRINTS Papain cysteine protease (C1) family signature 157 172 IPR000668 GO:0006508|GO:0008234
Arst6g04072 465 PRINTS Papain cysteine protease (C1) family signature 299 309 IPR000668 GO:0006508|GO:0008234
Arst6g04072 465 PRINTS Papain cysteine protease (C1) family signature 314 320 IPR000668 GO:0006508|GO:0008234
Arst6g04072 465 FunFam Cysteine protease 1 24 357 - -
Arst6g04072 465 FunFam Cysteine protease 1 375 438 - -
Arst6g04072 465 Pfam Granulin 389 436 IPR000118 -
Arst6g04072 465 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 314 333 IPR025661 -
Arst6g04072 465 SMART GRAN_2 378 435 IPR000118 -
Arst6g04072 465 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 37 349 IPR013128 GO:0008234
Arst6g04072 465 SUPERFAMILY Granulin repeat 375 409 - -
Arst6g04072 465 Gene3D Granulin 376 438 IPR037277 -
Arst6g04072 465 CDD Peptidase_C1A 140 354 IPR039417 -
Arst6g04072 465 SMART pept_c1 139 355 IPR000668 GO:0006508|GO:0008234
Arst6g04072 465 SUPERFAMILY Cysteine proteinases 37 355 IPR038765 -
Arst6g04072 465 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 297 307 IPR025660 -
Arst6g04072 465 Gene3D Cysteine proteinases 19 357 - -
Arst6g04072 465 Pfam Cathepsin propeptide inhibitor domain (I29) 46 106 IPR013201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04072 Arst-Chr6 108901995 108905929 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04072 6 108901995 108905929 Arst1g01387 1 15452209 15455428 ECH
Arst6g04072 6 108901995 108905929 Arst3g00691 3 4860875 4862824 ECH
Arst6g04072 6 108901995 108905929 Arst6g04072 6 108901995 108905929 ECH