Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04066 ATGGCACATCATCATCATCATCATGATTCTTTGTACTGCTCAGAACAACATTATTTTGATGATGAGGAACATGATCATGTGTTTCTAGAACAAGACATGTTGTGTGATGATTCAGAGTTGAAAACTCTTGTTTCAAAAGAACAAGAACAAGAGAAGAAACTCAGCATTCTTTGCATTGATGAGTGGGAAAGAAGAGAAGCAGTGGAATGGATTCTTAGAGTGAATGCATATTTCTCATTCTCTGCTCTCACAGCTTCTCTTGCTGTTAACTACCTTCACAGATTCCTCTTCACCTTCACCATGAAGAAGAATCAGCCATGGTTGACTCATCTTGCTGCAGTTGCTTGCATCTCTCTTGCTGCTAAAATGGAAGAGACACAAGTTCCTCTTCCTCTTGATTTACAAGTGGAGGACAGCAAATATGTGTTTGAGGCAAAAACAATAAAGAAAATGGAGATTTTGGTACTTTCAACTCTTGAGTGGAAGATGAATCCACCAACACCTCTCTCTTTCATTGATTACATCACAAGAAGACTTAAATGTTTTCACTTCCTAAACACATGTCAGTCTCTTCTTCTTTCTCTCTTACCAGATTCCAGGTTTATTGGTTATCTTCCTTCTGTGTTGGCAACTGCTACAATGATGCATGTAGTTAACAACAATGTGGAGCCTTGTCTTGCATCTGAATACCAAAATCAGTTCTTGGCTATTCTTGAAATCAACAAGGAGAAGTTAGAAGAATGCTACAATGTCATATTGGAGGTTGTATCAGAGTCAGGATTCAACTACAAAGAATCCAAAAAACGAAATTTTGGATCAATTATTATTCCTAGTAGCCCAAGTGGTGTAATTGATGTGTCATTTAGCTTTGATCATCATGACAGCTCTAATGATTCATGGGAAGTAGTATCTGCTAATGATTCTGTTTCATCAACACCAAACAGCATCAACAAGAAGAGGCCTAGGACTCAAGAACACACTGCTTCCTTTGAACAATTCAAGCAATGA 1008 0.379 MAHHHHHHDSLYCSEQHYFDDEEHDHVFLEQDMLCDDSELKTLVSKEQEQEKKLSILCIDEWERREAVEWILRVNAYFSFSALTASLAVNYLHRFLFTFTMKKNQPWLTHLAAVACISLAAKMEETQVPLPLDLQVEDSKYVFEAKTIKKMEILVLSTLEWKMNPPTPLSFIDYITRRLKCFHFLNTCQSLLLSLLPDSRFIGYLPSVLATATMMHVVNNNVEPCLASEYQNQFLAILEINKEKLEECYNVILEVVSESGFNYKESKKRNFGSIIIPSSPSGVIDVSFSFDHHDSSNDSWEVVSANDSVSSTPNSINKKRPRTQEHTASFEQFKQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04066 335 CDD CYCLIN_AtCycD-like_rpt2 167 252 - -
Arst6g04066 335 SUPERFAMILY Cyclin-like 37 164 IPR036915 -
Arst6g04066 335 FunFam D6-type cyclin 47 164 - -
Arst6g04066 335 CDD CYCLIN_AtCycD-like_rpt1 64 161 - -
Arst6g04066 335 Pfam Cyclin, C-terminal domain 166 264 IPR004367 -
Arst6g04066 335 MobiDBLite consensus disorder prediction 304 318 - -
Arst6g04066 335 Gene3D - 41 250 - -
Arst6g04066 335 MobiDBLite consensus disorder prediction 304 335 - -
Arst6g04066 335 Pfam Cyclin, N-terminal domain 59 164 IPR006671 -
Arst6g04066 335 PANTHER CYCLINS 42 259 IPR039361 -
Arst6g04066 335 SUPERFAMILY Cyclin-like 148 257 IPR036915 -
Arst6g04066 335 SMART Cyclin_C_2 166 279 IPR004367 -
Arst6g04066 335 SMART cyclin_7 69 157 IPR013763 -
Arst6g04066 335 Gene3D - 53 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04066 Arst-Chr6 108849227 108851924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04066 9 270 Core Cell Cycle Gene Families AT4G34160 47.552 1.97e-84 258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04066 6 108849227 108851924 Arst5g00815 5 7219276 7221162 ECH
Arst6g04066 6 108849227 108851924 Arst1g01390 1 15613560 15615777 ECH
Arst6g04066 6 108849227 108851924 Arst9g03541 9 111894700 111896599 ECH
Arst6g04066 6 108849227 108851924 Arst6g04066 6 108849227 108851924 ECH
Arst6g04066 6 108849227 108851924 Arst8g01353 8 18341402 18342686 PCT