Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04058 ATGGCTCACCAGGAGAACCCCACGCGCCCTCAGCGCGAGGCCAAAAAGAGGGCAGCAGCTGCACTCTCCGAGCTCCAAACCGGCGCGTCCAAGAAGAAGCGCGTCGTGTTGGGCGAACTCACTAACATCACCAACTCCAGCGTTGTACCACCACAACAACAACAACCTGCCAAGCCGGTTCTCGATAACCGCCGGTTTAGTCAGAACGAGGAGAAAATAAAAACCACCACTACCAGGGGAAAGAAGAGAACGGTCGGGAAAAACCAGAAACCGGCGGTGACTCCACCGGAAACTGTTGACGCCGCAAAGAAGCCGGAAGTTACTGTTGATCCGCAATTATGTGCTCCTTATGTTTCTGATATCTACGATTATCTTCGTAAAATGGAGGAAGATCCAAGTAAGAGGCCACTACCGGATTATGTGCAGAAAGTGCAGAGGCATGTGAATGCAAACATGAGGGGTGTTCTTGTGGATTGGTTAGTAGAGGTTGCCGAGGAGTACAAGCTTGTTTCCGATACCCTTTACTTCTCAGTTTCATACATTGACAGATACTTGTCTTTGACTGCCTTATCAAGTCAAAAGCTGCAGTTGCTTGGTGTTTCAGCAATGCTTATTGCATCAAAATATGAGGAGATAAAGCCACCTGAGGTGGAAGAATTTTGTTACATTACAGACAACACATACACCAAGGATCAGGTTGTGGAGATGGAAGCTGATATATTGAAGTCTTTGAAGTTTGAATTGGGTGGTCCAACAGTAAAGACCTTTCTAAGAAGATTCTCTAAAGTTGCTCAAGAGAGCAAAGATACATCAGACTTGCAATTTGAGTTTCTCACTAGCTACCTCGCAGAGCTCAGTTTGTTGGATTATAATTGTGTGAAATTTTTGCCTTCTTTGGTGGCAGCATCTGTTGTATTTCTAGCAAGATTTATGCTAAGCCCAAAGAAACATCCTTGGAATGCAGCACTTTATCAACTCACTAGATATAAACCAGCCGAATTGAAGGAATGTGCTCAAAATATACATGATCTGTACCTCAGCAGGAGAGGTGGCTCTTTGCAAGCTGTGAGAGAGAAATACAAACAACATAAGTTCAAATGCGTGGCCACAACTCCGTCACCTCCAGAGATTCCCGTTTCTTATTTTGAATTTAGAGTGGCAGATCCATAG 1170 0.4487 MAHQENPTRPQREAKKRAAAALSELQTGASKKKRVVLGELTNITNSSVVPPQQQQPAKPVLDNRRFSQNEEKIKTTTTRGKKRTVGKNQKPAVTPPETVDAAKKPEVTVDPQLCAPYVSDIYDYLRKMEEDPSKRPLPDYVQKVQRHVNANMRGVLVDWLVEVAEEYKLVSDTLYFSVSYIDRYLSLTALSSQKLQLLGVSAMLIASKYEEIKPPEVEEFCYITDNTYTKDQVVEMEADILKSLKFELGGPTVKTFLRRFSKVAQESKDTSDLQFEFLTSYLAELSLLDYNCVKFLPSLVAASVVFLARFMLSPKKHPWNAALYQLTRYKPAELKECAQNIHDLYLSRRGGSLQAVREKYKQHKFKCVATTPSPPEIPVSYFEFRVADP 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04058 389 FunFam Mitotic cyclin 6 136 236 - -
Arst6g04058 389 Gene3D - 120 370 - -
Arst6g04058 389 PANTHER CYCLINS 74 368 IPR039361 -
Arst6g04058 389 Pfam Cyclin, C-terminal domain 251 373 IPR004367 -
Arst6g04058 389 MobiDBLite consensus disorder prediction 46 62 - -
Arst6g04058 389 Pfam Cyclin, N-terminal domain 120 248 IPR006671 -
Arst6g04058 389 MobiDBLite consensus disorder prediction 46 97 - -
Arst6g04058 389 MobiDBLite consensus disorder prediction 1 19 - -
Arst6g04058 389 SMART Cyclin_C_2 251 374 IPR004367 -
Arst6g04058 389 SUPERFAMILY Cyclin-like 110 248 IPR036915 -
Arst6g04058 389 SMART cyclin_7 158 242 IPR013763 -
Arst6g04058 389 SMART cyclin_7 255 343 IPR013763 -
Arst6g04058 389 SUPERFAMILY Cyclin-like 251 376 IPR036915 -
Arst6g04058 389 PIRSF Cyclin_A_B_D_E 1 381 IPR046965 GO:0016538|GO:0044772
Arst6g04058 389 Gene3D - 136 249 - -
Arst6g04058 389 FunFam Cyclin A1 238 370 - -
Arst6g04058 389 CDD CYCLIN_AtCycA-like_rpt2 251 365 - -
Arst6g04058 389 MobiDBLite consensus disorder prediction 64 78 - -
Arst6g04058 389 ProSitePatterns Cyclins signature. 153 184 IPR006671 -
Arst6g04058 389 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04058 Arst-Chr6 108730131 108733162 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04058 1 383 Core Cell Cycle Gene Families AT1G47230 56.250 3.44e-152 432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04058 6 108730131 108733162 Arst6g04058 6 108730131 108733162 ECH