Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g04057 ATGGCTCACCAGGAGAACCCCACGCGCCCTCAGCGCGAGGCCAAAAAGAGGGCAGCAGCTGCACTCTCCGAGCTCCAAACCGGCGCGTCCAAGAAGAAGCGCGTCGTGTTGGGCGAACTCACTAACATCACCAACTCCAGCGTTGTACCACCACAACAACAACAACCTGCCAAGCCGGTTCTCGATAACCGCCGGTTTAGTCAGAACGAGGAGAAAATAAAAACCACCACTACCAGGGGAAAGAAGAGAACGGTCGGGAAAAACCAGAAACCGGCGGTGACTCCACCGGAAACTGTTGACGCCGCAAAGAAGCCGGAAGTTACTGTTGATCCGCAATTATGTGCTCCTTATGTTTCTGATATCTACGATTATCTTCGTAAAATGGAGGAAGATCCAAGTAAGAGGCCACTACCGGATTATGTGCAGAAAGTGCAGAGGCATGTGAATGCAAACATGAGGGGTGTTCTTGTGGATTGGTTAGTAGAGGTTGCCGAGGAGTACAAGCTTGTTTCCGATACCCTTTACTTCTCAGTTTCATACATTGACAGATACTTGTCTTTGACTGCCTTATCAAGTCAAAAGCTGCAGTTGCTTGGTGTTTCAGCAATGCTTATTGCATCAAAATATGAGGAGATAAAGCCACCTGAGGTGGAAGAATTTTGTTACATTACAGACAACACATACACCAAGGATCAGGTTGTGGAGATGGAAGCTGATATATTGAAGTCTTTGAAGTTTGAATTGGGTGGTCCAACAGTAAAGACCTTTCTAAGATTCTCTAAAGTTGCTCAAGAGAGCAAAGATACATCAGACTTGCAATTTGAGTTTCTCACTAGCTACCTCGCAGAGCTCAGTTTGTTGGATTATAATTGTGTGAAATTTTTGCCTTCTTTGGTGGCAGCATCTGTTGTATTTCTAGCAAGATTTATGCTAAGCCCAAAGAAACATCCTTGGAATGCAGCACTTTATCAACTCACTAGATATAAACCAGCCGAATTGAAGGAATGTGCTCAAAATATACATGATCTGTACCTCAGCAGGAGAGGTGGCTCTTTGCAAGCTGTGAGAGAGAAATACAAACAACATAAGTTCAAATGCGTGGCCACAACTCCGTCACCTCCAGAGATTCCCGTTTCTTATTTTGAATTTAGAGTGGCAGATCCATAG 1167 0.449 MAHQENPTRPQREAKKRAAAALSELQTGASKKKRVVLGELTNITNSSVVPPQQQQPAKPVLDNRRFSQNEEKIKTTTTRGKKRTVGKNQKPAVTPPETVDAAKKPEVTVDPQLCAPYVSDIYDYLRKMEEDPSKRPLPDYVQKVQRHVNANMRGVLVDWLVEVAEEYKLVSDTLYFSVSYIDRYLSLTALSSQKLQLLGVSAMLIASKYEEIKPPEVEEFCYITDNTYTKDQVVEMEADILKSLKFELGGPTVKTFLRFSKVAQESKDTSDLQFEFLTSYLAELSLLDYNCVKFLPSLVAASVVFLARFMLSPKKHPWNAALYQLTRYKPAELKECAQNIHDLYLSRRGGSLQAVREKYKQHKFKCVATTPSPPEIPVSYFEFRVADP 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g04057 388 SUPERFAMILY Cyclin-like 110 248 IPR036915 -
Arst6g04057 388 FunFam Mitotic cyclin 6 136 236 - -
Arst6g04057 388 SMART cyclin_7 158 242 IPR013763 -
Arst6g04057 388 SMART cyclin_7 254 342 IPR013763 -
Arst6g04057 388 Pfam Cyclin, C-terminal domain 251 372 IPR004367 -
Arst6g04057 388 CDD CYCLIN_AtCycA-like_rpt2 251 364 - -
Arst6g04057 388 MobiDBLite consensus disorder prediction 46 62 - -
Arst6g04057 388 Gene3D - 136 249 - -
Arst6g04057 388 SMART Cyclin_C_2 251 373 IPR004367 -
Arst6g04057 388 MobiDBLite consensus disorder prediction 46 97 - -
Arst6g04057 388 MobiDBLite consensus disorder prediction 1 19 - -
Arst6g04057 388 PANTHER CYCLINS 74 367 IPR039361 -
Arst6g04057 388 FunFam Cyclin A1 238 369 - -
Arst6g04057 388 Pfam Cyclin, N-terminal domain 120 248 IPR006671 -
Arst6g04057 388 Gene3D - 120 369 - -
Arst6g04057 388 PIRSF Cyclin_A_B_D_E 1 380 IPR046965 GO:0016538|GO:0044772
Arst6g04057 388 MobiDBLite consensus disorder prediction 64 78 - -
Arst6g04057 388 ProSitePatterns Cyclins signature. 153 184 IPR006671 -
Arst6g04057 388 MobiDBLite consensus disorder prediction 1 30 - -
Arst6g04057 388 SUPERFAMILY Cyclin-like 251 375 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g04057 Arst-Chr6 108730130 108733162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g04057 1 382 Core Cell Cycle Gene Families AT1G47230 55.990 1.64e-149 426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g04057 6 108730130 108733162 Arst8g01328 8 18016786 18019047 PCT