Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02599 ATGGACCCAGAGCAAGAAATGAGTTCCTCAGATTCAAGGGATGATAAAAAAGGTTCGCAACATAATGATGAAGCAACAAATGAAGAAGACAAAACCATGAAGAAACCAGACAAGATTATTCAGTGTCCAAGATGCAAGAGCATGGACACAAAATTCTGTTACTTCAATAACTACAACGTCAACCAACCGCGCCATTTCTGCAAGAACTGCCAGCGCTACTGGACAGCCGGCGGAACAATGAGGAATGTCCCCGTTGGCGCCGGCAGAAGGAAGCACAAGCACTTGGCTTCACAGTTCCGCAGTGTCCTAGTAGCCGCGGCCGCAGCCGCAGCCGCAGCCGCGGCCACCCGAGTTCCAGAATCCACAAATTCGTCGTCAAAAAATAATAATAGTGACAATGCTAGTGGTACCGTGTTGGAATTTTGCCAGGAAAGAGGAATTGTGAATGAAAATTCGTCTATCATTTATTGTACTGAATCTGAGGAGGAATCATTATCGTTGTGTACTAACAATAATAATGAATCTTCTTCAGAAAACAACAACAACAACGCATCAAAATTGTTGCAATATTACCCTGTTCCTCCATGGGTTATGCCTTGGAACAATGTTGTTCCACAACATGGTCCAAACTCAATTCAATGGTGTCCAACACCAATGGTGGCAGCAGCAACAATTCCAGTTCATCTTGTTCCAGGGCCATGCTGGGGTGGAACACCTGTGTGGGTCGCACCTGGACCTGCACCGGGGAATGTGTCAATAGGATCCAATCATAGCCGTTCATCGCCTTCTTCGTCCACTAGTAATAACAATAGCTGCTATTCCGGCAACGGGAATTCTCCAATACTTGGCAAGCATAGTAGAGATCACAGTACTGTTTTCATTGATGAACAGAAATCAAGTAAATGTTTCTTGGTTCCGAAGATTCCGAGAATTGATGAGCAAAATAATAATGAGGCTTCAGTAAGTCCTATTTGGGCTACATTGGCATGA 990 0.4455 MDPEQEMSSSDSRDDKKGSQHNDEATNEEDKTMKKPDKIIQCPRCKSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKHKHLASQFRSVLVAAAAAAAAAAATRVPESTNSSSKNNNSDNASGTVLEFCQERGIVNENSSIIYCTESEEESLSLCTNNNNESSSENNNNNASKLLQYYPVPPWVMPWNNVVPQHGPNSIQWCPTPMVAAATIPVHLVPGPCWGGTPVWVAPGPAPGNVSIGSNHSRSSPSSSTSNNNSCYSGNGNSPILGKHSRDHSTVFIDEQKSSKCFLVPKIPRIDEQNNNEASVSPIWATLA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02599 329 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Arst6g02599 329 Pfam Dof domain, zinc finger 37 94 IPR003851 GO:0003677|GO:0006355
Arst6g02599 329 PANTHER CYCLIC DOF FACTOR 2 9 328 IPR045174 GO:0003700|GO:0006355
Arst6g02599 329 MobiDBLite consensus disorder prediction 252 286 - -
Arst6g02599 329 MobiDBLite consensus disorder prediction 252 285 - -
Arst6g02599 329 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Arst6g02599 329 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02599 Arst-Chr6 83329876 83332366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02599 4 329 C2C2-Dof Transcription Factor Family AT3G47500 34.722 2.67e-48 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst6g02599 zf-Dof 2.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02599 - - ahf:112696882 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02599 6 83329876 83332366 Arst6g02599 6 83329876 83332366 ECH