Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01717 ATGGTTAACACAACGGAATCTTCCTCTAACCACCACTCCCCGCCGATGACGGCGGTCCCCCCTGAATCCGACAGCCCTAAGTTCCCGCGAAAAAATCTCCCTTCTCCATGGGCTCAGGTTGTCCGCGGCGCCGAACCCGAATCCACCGCCGGGACTCCCCAATCGCCGCCGCTGCCGTCTTCTGCCTCCTCCTCCTCCTCCTCCCTTGCTGCCAGCGTTGCGTCAGTCCCGGAGCAGCTGCCTTCTTCAGATTCCTCCTCCCCAAAGGCCGTAGCTGCCTCGCCGCTGGTGGACAACAGGAGTGTTGTGACAGCTCCTCCCGATAGCTCCGATGGCGGTGAGGGCAATGCGGGTAGGTCCAAGAAACCCGCGTGGAATAAACCTTCAAACGGGGTCGTATCTGAGGCCGGTCTTGTGATGGGAGGGTCGTGGCCTGCTTTGTCTGAATCCACCAAAGGGACTCCCAAATTGGCCGCCGAATCATCCTCCAAGACTGCCTTAGATGCATCTCTCTCCACATCTCAGGGTCCTGTAACTTCGAACGCTCCCCAAAGACAAGCTACTAGCCATGCAAAACCCAACTCTGCAACAACTTATAACATACCTAATAGGCAAAGACCAATGAAGCGTGGAGGTGGCAGCAACGTTGGGTCTGGTCCTTCTTCAAGCGGCTTTCCCAATGTTGCGCCACCTCCACCACCCTTTCCTGTATACCCAGTTCCTGCACCAGCAATTGGTTACAGTAATGTCATGCCGGGAGCTCCAGACCATTCTCCAAGAGATCATTATCGTCGTAATACCTGGGATGCAAGACCACCTGTTGGGAATTTTGTGCCTCCGATGACTGAACATCGGGGTTCATCTGAACATCGGGGTTCATCTCGCCGGGGTAATTTTGGGTCCCATCCTAGGGGAGATGGCTCCTATCATAATAATTATGGTAGTAGGCGTGATCATGATCGTGCCAATTATGGGAATGCTAGAGATGCTCATGTACACCAACCAGGGGGAATATTGAGGCACCCACCACCGAATGCTCCTTCATTTGTTAACCCCGCACATGTTGGATCCTCACCCTATGCTAACCACATGGGCTTCCATGGTCCGGACTTATTATATGTTTCACCAGTACAAGTAGATCCCATGAGGGGCATGCCATTCTTTCCTTCCACTCCTCTTCCTCCTTCTCCTCCTCCTCCTCCTCCTACGATGTTCTTCCATGCAGAAACTTCTTCTCCTCTTAACAATATGATTATCAAGCAAATTGAATACTACTTTAGTGATGCTAATTTAGTAAAAGATGAATATTTAAGGTCCAACATGGATGAACAGGGTTGGGTTCCCATTACGTTGATAGCAAACTTTCCTCGTGTTAAAAATTTAACAAGTAACATCCCATTGATACTGGATTCATTAAGAGGTTCAGCTATTGTCGAAGTGCAAGGTGACAAGTTAAGGAGGCATAATGAGTGGATGAGATGGCTGCCAGCGACTCATTTTCGGTCAGATTCCAGTTCAATATCTACTGGTGGACCGAATTTCAATAACCTTGCAGCTAATTTTCAAACAATCACTTTGGAAGAAGCAGCTAAAATTGAAGGTACAGTCGAGATGTCTGATGTTACTCAAATCTCAAATGGTGATGATACTGCTGCTCTTGTCAACAAGAATTAG 1674 0.4952 MVNTTESSSNHHSPPMTAVPPESDSPKFPRKNLPSPWAQVVRGAEPESTAGTPQSPPLPSSASSSSSSLAASVASVPEQLPSSDSSSPKAVAASPLVDNRSVVTAPPDSSDGGEGNAGRSKKPAWNKPSNGVVSEAGLVMGGSWPALSESTKGTPKLAAESSSKTALDASLSTSQGPVTSNAPQRQATSHAKPNSATTYNIPNRQRPMKRGGGSNVGSGPSSSGFPNVAPPPPPFPVYPVPAPAIGYSNVMPGAPDHSPRDHYRRNTWDARPPVGNFVPPMTEHRGSSEHRGSSRRGNFGSHPRGDGSYHNNYGSRRDHDRANYGNARDAHVHQPGGILRHPPPNAPSFVNPAHVGSSPYANHMGFHGPDLLYVSPVQVDPMRGMPFFPSTPLPPSPPPPPPTMFFHAETSSPLNNMIIKQIEYYFSDANLVKDEYLRSNMDEQGWVPITLIANFPRVKNLTSNIPLILDSLRGSAIVEVQGDKLRRHNEWMRWLPATHFRSDSSSISTGGPNFNNLAANFQTITLEEAAKIEGTVEMSDVTQISNGDDTAALVNKN 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01717 557 ProSiteProfiles La-type HTH domain profile. 408 497 IPR006630 -
Arst6g01717 557 MobiDBLite consensus disorder prediction 311 327 - -
Arst6g01717 557 SUPERFAMILY "Winged helix" DNA-binding domain 406 496 IPR036390 -
Arst6g01717 557 MobiDBLite consensus disorder prediction 225 241 - -
Arst6g01717 557 MobiDBLite consensus disorder prediction 147 204 - -
Arst6g01717 557 SMART la 412 488 IPR006630 -
Arst6g01717 557 PANTHER LUPUS LA PROTEIN-RELATED 143 508 IPR045180 -
Arst6g01717 557 MobiDBLite consensus disorder prediction 1 353 - -
Arst6g01717 557 CDD LAM 416 487 - -
Arst6g01717 557 MobiDBLite consensus disorder prediction 48 92 - -
Arst6g01717 557 MobiDBLite consensus disorder prediction 1 16 - -
Arst6g01717 557 Pfam La domain 418 473 IPR006630 -
Arst6g01717 557 Gene3D - 406 495 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01717 Arst-Chr6 17722479 17726834 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01717 6 17722479 17726834 Arst6g01717 6 17722479 17726834 ECH
Arst6g01717 6 17722479 17726834 Arst8g00209 8 2734852 2737548 PCT