Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01682 ATGTCAGTTATTGCCGTTGGATCATTCCTCCCGCCACCGCCGCCGTACCGGAGGATCAAGCCTCGCTTCACGACCATGGTGTCTCTCCGATCCGACACTGTATCGGTTGCAGAAACAAGCAGCATATTGAGGAAGCTGAAGGAAGAGTGCGCCACGCCTCTTCCCGTACTTCGTCAAGTGGCGGATGCCATGTCAGCTGACATGAGAGCTGGCCTCGCCGCCGCACACGGCCTTCCCATGATACCCTCCTTCGTTGAGGATCTTCCCACTGGGAATGAGAAGGGATTGTTCTATGCTTTGGACCTTGGTGGAACCAACTTCCGTGTGCTGAGGGTGCAGTTGGGCGGAAACAATGAGCGTGTCGTCGCCACCGACTTCGACCAAGTGTCCATACCTCCTCAGCTTATGTCTGCTACATGTGAGGAGCTTTTTGATTTCATTGCTTTAGGACTAGCAAAACTCGCAGCAAAAGATGATGGTAGATTCAATTTGTCGCCTGGAAAGAAGGGAGAAATCGGGTTCACGTTTTCATTTCCAGTGAGGCAGACATCTATTGACTCCGGCATACTAGTCAAGTGGACCAAAGGTTTTGCAGTCAGTGGAGCAGCAGGAAGAGATGTGGTTGCTTGTTTGAATGAGGCTATGGAGAGGCAAGGACTAGATATGCAAGTCTCTGCTCTGGTGAATGATGCTGTGGCAACATTAGCTGGAGCAGAATATTGGGACAATGATGTTGCAGTTGCTATCATTTTAGGTACCGGAACCAATGCCTGCTATGTTGAGCAAATTGATGCCATTCCTAAGTTACAAGGTCATGTCTCCTCTTCTGGGAAAATGGTTAGTAATNNNNNNNGGGGAGCATTCTCAAAACGTCTCCCTTTAACCGAGTTTGATAGAGCGATGGATGCTGCTAGTATCAACCCTGGTGAGCAGATCTTTGAAAAGACAATCTCAGGAATGTATCTAGGGGAAATTGTGAGACTAGTGCTTCTGGAAATGGCTGCAACTGGTGAATTGTTTGGGAAATCAATCCCAGAAAATTTATATACGCCTTTCATACTTGGGACCCCAGATCTATGTGCCATGCAGCAGGACAAGTCAGGTGATTTACAAGGCGTTGGGTCCCTCCTCTATGATAAAGCAAGGGTTGAGTCCACTTTTAGTGCAAGGAAAACCGTTTTAGAGGTTTGTGACACAATTGTGAAGCGGGGTGGAAGCTTAGCAGGTGCAGGAATTGTGGCGATTCTGCAAAAAATGGAGGAGGATTCAAAAGGAGTGATCTTTGGAAAGAGAACAGTTGTGGCCATTGATGGAGGCTTATATGAAAATTATCCTCAATACAGGACATATATGCAAGATTCGGTCAAAGAGCTCATAGGATCAGAGAAGTCAAACAATTTGGTAATTGAACATTCAAAAGATGGATCTGGCATAGGTGCTGCTCTTTTGGCAGCTACAAACTCCATGTACAAGCATGACTTCTAG 1485 0.4673 MSVIAVGSFLPPPPPYRRIKPRFTTMVSLRSDTVSVAETSSILRKLKEECATPLPVLRQVADAMSADMRAGLAAAHGLPMIPSFVEDLPTGNEKGLFYALDLGGTNFRVLRVQLGGNNERVVATDFDQVSIPPQLMSATCEELFDFIALGLAKLAAKDDGRFNLSPGKKGEIGFTFSFPVRQTSIDSGILVKWTKGFAVSGAAGRDVVACLNEAMERQGLDMQVSALVNDAVATLAGAEYWDNDVAVAIILGTGTNACYVEQIDAIPKLQGHVSSSGKMVSNXXXGAFSKRLPLTEFDRAMDAASINPGEQIFEKTISGMYLGEIVRLVLLEMAATGELFGKSIPENLYTPFILGTPDLCAMQQDKSGDLQGVGSLLYDKARVESTFSARKTVLEVCDTIVKRGGSLAGAGIVAILQKMEEDSKGVIFGKRTVVAIDGGLYENYPQYRTYMQDSVKELIGSEKSNNLVIEHSKDGSGIGAALLAATNSMYKHDF 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01682 494 ProSitePatterns Hexokinase domain signature. 172 197 IPR019807 GO:0004396|GO:0005524|GO:0006096
Arst6g01682 494 Gene3D - 63 473 - -
Arst6g01682 494 PANTHER HEXOKINASE 35 488 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Arst6g01682 494 FunFam Phosphotransferase 83 251 - -
Arst6g01682 494 Pfam Hexokinase 43 240 IPR022672 GO:0005524|GO:0005975|GO:0016773
Arst6g01682 494 SUPERFAMILY Actin-like ATPase domain 35 242 IPR043129 -
Arst6g01682 494 Gene3D - 83 484 - -
Arst6g01682 494 ProSiteProfiles Hexokinase domain profile. 37 485 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Arst6g01682 494 CDD NBD_sugar-kinase_HSP70_actin 99 261 - -
Arst6g01682 494 Pfam Hexokinase 247 485 IPR022673 GO:0005524|GO:0005975|GO:0016773
Arst6g01682 494 SUPERFAMILY Actin-like ATPase domain 244 488 IPR043129 -
Arst6g01682 494 PRINTS Hexokinase family signature 224 240 - -
Arst6g01682 494 PRINTS Hexokinase family signature 311 333 - -
Arst6g01682 494 PRINTS Hexokinase family signature 247 261 - -
Arst6g01682 494 PRINTS Hexokinase family signature 470 486 - -
Arst6g01682 494 PRINTS Hexokinase family signature 393 415 - -
Arst6g01682 494 PRINTS Hexokinase family signature 172 197 - -
Arst6g01682 494 PRINTS Hexokinase family signature 98 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01682 Arst-Chr6 17437655 17441212 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01682 6 17437655 17441212 Arst6g01682 6 17437655 17441212 ECH