Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01664 ATGGCTTCCTTAGAAGAAAAGGTTAAAACTTGTGGTGTTGGTGTTGTTGGGGGTCAAACTCTAGTTGCCGAGATGAAGCTCCTCAAGGAAATGCAAGAACACTCTGGGGTGAGAAAGACTTTGAATTCAGAACTGTGGCATGCTTGTGCTGGCCCTCTTGTCTCTTTGCCTCAAGTGGGAAGTCTTGTTTATTACTTTCCCCAGGGACATAGTGAGCAGGTGGCAGCTTCCACCAGAAGAACAGCAACATCTCAGATTCCAAACTATCCAAACCTTCCATCTCAGTTGCTCTGCCAAGTTCAAAATGTCACACTTCATGCAGACAAAGATACAGATGAAATCTATGCTCAAATGAGTCTCCAGCCCTTGAATTCGGAGAAAGATGTGTTTCCTATATCTGATTTTGGCCTAAAGCACAGCAAGCATCCAACTGAGTTTTTCTGCAAAACTTTGACTGCAAGTGACACCAGCACACACGGCGGTTTCTCAGTTCCACGGAGGGCGGCAGAAAAGCTCTTTCCTCCACTGGACTACACAATTCAGCCTCCAACACAAGAACTAGTTGTCCGTGATTTGCATGACAATACTTGGACATTTCGACATATATACCGGGGTCAGCCCAAGAGACACCTTTTAACAACAGGATGGAGTTTATTTGTCGGATCAAAAAGGCTTAGAGCAGGAGATTCTGTTCTATTTATCAGGGATGAGAAATCACAACTGCGAGTTGGTGTTAGGCGTGTTAATCGCCAACAAACAACATTGCCATCATCAGTTCTTTCTGCTGATAGCATGCACATTGGTGTGCTTGCTGCTGCAGCTCACGCGGCTTCTAACCGAATTCCTTTCACTATTTTCTATAATCCAAGGGCATGCCCTTCAGAATTTGTTATTCCACTTGCTAAGTACAGAAAATCTGTATATGGGACACAACTCTCAGTTGGCATGAGATTTGGTATGATGTTTGAGACAGAAGAATCCGGTAAGCGCAGGTATATGGGTACAATAGTTGGTATCAGTGACTTGGATCCTTTGAGATGGCCTGGTTCTAAGTGGCGAAATATTCAGGTGGAGTGGGATGAACCAGGATGTGGTGACAAGCAGAATAGAGTTAGTGTATGGGAAATTGAGACTCCTGAAAGCCTTTTTATATTTCCTTCTTTAACTTCGAGTCTAAAACGGCCATTACAATCTGGATTTTTGGAAAACGACTGGGGAGCTTTGATACGAAGACCATATATAAGAGTTCCTGAAAACGGTGCAACGGAGCTCGCGAATTCAATGCCAAATATCTACTCTGAACACCTGATGAAAATGCTTTTGAAGCCACAACTTATTAACAATAATGGAGCCATGGCCATGCAACAAGAATCTGTTGCTATGAGAGGTACTCTACAAGATGCAAAGACTACACAGGCACCAGAGAACCATAAAGTTAATCTTGCTAGTACAGAGAACCTGCCACTGAAAAATTTGTATTCTCAATCTGTTCCTGAACAAGCTAATGTCGTGAATTTACATTCTCAAGCGAAAAATGATAACCATATGTCTTCTGGAACAGTTATTGATAAGCCGAAGCTCGAACCTGAGGTATTAAATGATCAAATGTATGAGATTCCATCTGGAGGAACAGGAACCAACATTGAAAAAGTGGCCTCAAATCCTGCTAACTCTCAAAGTGTTGCGAACCAATTGGCATTCCTTAATCAAAACCAGAGTCATCCACTTGCGCAATCCGGTTCATGGCCTATACAACCTCAGTTAGAATCATCGGTATCCCATCCTCAACTTGTTGACATGCCTCAAGGTGATTCTGCAATTGCAAACAGCATGCTTCCTCAGCTAGACATTGATGAATGGATGGTGTATTCTTCTAACCAAACTTTTGCTAACCAAAACCGATCAACTGGGCCGGTATCAGATTTTCAAGAGCATTCTGCCGCACTTCAACCTCAAGTAGTGAATCCTTCCATGCCAATGAACCAAGAAGTGTGGGATCAATATGTCAAGAATTTTAAGCTTTTGTCTCAAGTAGACCAGATGACATCTGTCTGTCAGCCGGGGATGTACAGCCTCAACGGTATATCGAGTTCAAACAATTTGAGGGATCTTTCAGCTGAGAGCAATAATCAAAGTGAAATTTGTGTCGATGTTAGTAATAGTGTAAATACAACCATGGTTGATCCTTCAACTTCAAGCACCATTTTGGATGAGTATTGCACACTGAAGGAGAGGGATTTCCAGAATCCACAAGATTGCATCGTCGGCAACTTAAGTTCTAGCCAGGATGTCCAGTCTCAGATAACCTCTGCAAGTCTAACTGAGTCACATGCCTTTCCTCTGCAAGACAACTCAGGTGGTACATCTTCAAGTCATGTTGATTTTGATGAAAGCAGCTTTCTGCAGAATAACTCATGGCAACCAGTTGCTGCGCCCGTGCGAACCTACACTAAGGTGCAAAAGGCAGGATCTGTAGGAAGATCAATTGATGTCACAACTTTCAAGAACTACGAAGAGCTGATCCGCGCGATTGAATGCATGTTCGGACTAGATGGTCTGCTGAATGACACCAAAGGTTCCGGCTGGAAACTGGTGTATGTGGATTATGAGAGTGATGTTCTTCTTGTTGGGGATGATCCTTGGGAGGAATTTGTCGGCTGCGTTCGATGCATCAGAATCTTATCGCCTTCAGAAGTTCAACAGATGAGTGAAGAGGGAATGAAGCTTCTCAACAGTGGAGCCTTGCAAGGGATCAATGTTTGA 2763 0.4325 MASLEEKVKTCGVGVVGGQTLVAEMKLLKEMQEHSGVRKTLNSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAASTRRTATSQIPNYPNLPSQLLCQVQNVTLHADKDTDEIYAQMSLQPLNSEKDVFPISDFGLKHSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAAHAASNRIPFTIFYNPRACPSEFVIPLAKYRKSVYGTQLSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIETPESLFIFPSLTSSLKRPLQSGFLENDWGALIRRPYIRVPENGATELANSMPNIYSEHLMKMLLKPQLINNNGAMAMQQESVAMRGTLQDAKTTQAPENHKVNLASTENLPLKNLYSQSVPEQANVVNLHSQAKNDNHMSSGTVIDKPKLEPEVLNDQMYEIPSGGTGTNIEKVASNPANSQSVANQLAFLNQNQSHPLAQSGSWPIQPQLESSVSHPQLVDMPQGDSAIANSMLPQLDIDEWMVYSSNQTFANQNRSTGPVSDFQEHSAALQPQVVNPSMPMNQEVWDQYVKNFKLLSQVDQMTSVCQPGMYSLNGISSSNNLRDLSAESNNQSEICVDVSNSVNTTMVDPSTSSTILDEYCTLKERDFQNPQDCIVGNLSSSQDVQSQITSASLTESHAFPLQDNSGGTSSSHVDFDESSFLQNNSWQPVAAPVRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGALQGINV 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01664 920 Pfam AUX/IAA family 811 901 IPR033389 -
Arst6g01664 920 SMART B3_2 147 249 IPR003340 GO:0003677
Arst6g01664 920 FunFam Auxin response factor 810 903 - -
Arst6g01664 920 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 38 904 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst6g01664 920 Gene3D - 810 903 - -
Arst6g01664 920 FunFam Auxin response factor 311 383 - -
Arst6g01664 920 ProSiteProfiles B3 DNA-binding domain profile. 147 249 IPR003340 GO:0003677
Arst6g01664 920 Gene3D - 311 383 - -
Arst6g01664 920 Gene3D - 144 248 IPR015300 -
Arst6g01664 920 Pfam B3 DNA binding domain 147 248 IPR003340 GO:0003677
Arst6g01664 920 FunFam Auxin response factor 145 249 - -
Arst6g01664 920 Pfam Auxin response factor 273 356 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst6g01664 920 SUPERFAMILY CAD & PB1 domains 818 893 - -
Arst6g01664 920 CDD B3_DNA 146 247 IPR003340 GO:0003677
Arst6g01664 920 ProSiteProfiles PB1 domain profile. 814 898 IPR000270 GO:0005515
Arst6g01664 920 SUPERFAMILY DNA-binding pseudobarrel domain 135 276 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01664 Arst-Chr6 17121813 17126829 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst6g01664 AUX_IAA 4.7e-11 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01664 6 17121813 17126829 Arst6g01664 6 17121813 17126829 ECH