Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01636 ATGCTCAACGCCGAGCACCACTTCACAACCTTCAAGACTAAGTTCGGAAAGTCTTATGCCACTCAAGAAGAGCACGATTACCGCTTTGGCGTCTTCCGGGCGAACCTGAGGAGGGCGAAGCTGCACGCGAAGCTGGATCCGTCGGCGGAGCACGGTGTCACGAAATTCTCCGATCTGACGCCAGAGGAGTTCAAGAGGCAGTACCTTGGGTTGAAGCCGCTGCGGCTTCCGTCGACCGCTAACAAGGCTCCAATCCTGCCGACGAGCGATCTTCCAGAGAATTTCGATTGGCGTGACAAGGGAGCTGTTACTCCAGTCAAGAACCAGGGCTCTTGTGGTTCATGTTGGGCGTTTAGCACGACTGGGGCTTTGGAAGGCGCTCATTATCTGTCCACCGGAGAGCTTGTCAGCCTTAGTGAGCAACAGCTTGTAGACTGTGACCATGTGTGTGATCCAGAAGAATATGGAGCATGTGACGCAGGCTGCAATGGTGGGTTGATGAACAATGCTTTCGACTACATACTCCAGGCTGGAGGAGTACAGACAGAGAAGGACTATCCTTACAGTGGAAGAGACGAGACCTGCAAATTCGACAAGAGCAAGGTCGCAGCTACAGTTGCGAATTTCAGTGTGGTTTCCCTTGATGAAGACCAAATTGCTGCAAATCTAGTGAAGCATGGCCCTCTTGCAGTTGGTATCAATGCAATATTCATGCAGACATACATAGGGGGAGTCTCATGCCCCTACATCTGCGGCAAGAATCTGGATCATGGCGTGCTCCTAGTGGGTTATGGCGCGGCCGGATATGCTCCCATTCGCTAAGGACAAGCCATTCTGGATCATCAAGAATTCATGGAGAGAGCTGGGGAGAGGATGGATACTACAAGATCTGCAGGGGTAAGAATGTGTGTGGAGTGGATTCCATGGTCTCAAGTGTAG 939 0.5186 MLNAEHHFTTFKTKFGKSYATQEEHDYRFGVFRANLRRAKLHAKLDPSAEHGVTKFSDLTPEEFKRQYLGLKPLRLPSTANKAPILPTSDLPENFDWRDKGAVTPVKNQGSCGSCWAFSTTGALEGAHYLSTGELVSLSEQQLVDCDHVCDPEEYGACDAGCNGGLMNNAFDYILQAGGVQTEKDYPYSGRDETCKFDKSKVAATVANFSVVSLDEDQIAANLVKHGPLAVGINAIFMQTYIGGVSCPYICGKNLDHGVLLVGYGAAGYAPIRFXGQAILDHQEFMGXRAGERMDTTRSAGVRMCVEWIPWSQV 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01636 314 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 255 265 IPR025660 -
Arst6g01636 314 PRINTS Papain cysteine protease (C1) family signature 109 124 IPR000668 GO:0006508|GO:0008234
Arst6g01636 314 PRINTS Papain cysteine protease (C1) family signature 257 267 IPR000668 GO:0006508|GO:0008234
Arst6g01636 314 FunFam Cysteine protease RD19A 1 294 - -
Arst6g01636 314 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 109 120 IPR000169 -
Arst6g01636 314 Gene3D Cysteine proteinases 1 276 - -
Arst6g01636 314 SUPERFAMILY Cysteine proteinases 4 267 IPR038765 -
Arst6g01636 314 Pfam Cathepsin propeptide inhibitor domain (I29) 8 64 IPR013201 -
Arst6g01636 314 SMART Inhibitor_I29_2 8 64 IPR013201 -
Arst6g01636 314 CDD Peptidase_C1A 92 265 IPR039417 -
Arst6g01636 314 SMART pept_c1 91 282 IPR000668 GO:0006508|GO:0008234
Arst6g01636 314 Pfam Papain family cysteine protease 91 267 IPR000668 GO:0006508|GO:0008234
Arst6g01636 314 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 5 270 IPR013128 GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01636 Arst-Chr6 16811092 16813694 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01636 6 16811092 16813694 Arst8g00138 8 1551218 1553084 PCT