Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01632 ATGATCAAAGCAAGGATGATGGGAACTGATCAGGAGAGAAAGCAATTGATGAGGAAGCAAGCACAAGCCAATTCAAGAAAGGGTTGTATGAGGGGAAAAGGAGGCCCTCAGAATGCAACATGCACCTACAAAGGTGTAAGGCAAAGGATTTGGGGCAAATGGGTTGCCGAGATTCGCGAACCACGACGTGGTTCGCGTATCTGGCTTGGGACGTTCAATACGTCCCATGAAGCCGCCTTGGCTTACGATGCTGCGGCGCGTAAGCTTTACGGCCATGATGCTAAGCTCAATCTCCCAGACCTTCAACCCTCTATCTCCACAACTCAGGATATTCAAAGAGACAACCTTCTTCAACAACAATCTCACATGATGATTAATCAGCACAACATTGGCACCTCTTTCAACAACAACAACAACAATAACCTCAAACCTTTGGTGCCCATGGCTGAGGTTGGTGTTACACCAATTTACACCAATGAAGGCATTATGTCTCTTCCCTTAAGAGATGATATCAACACCTACACCACCATCAACAACATCAATAACTTCAACACCAAACCTATAATTTTGGAAAGCTTCCGAAACCCAACAAAGCCTATGGACAATAATATTATCAATAATAATAATGTAGAGAAGCCAAGTTCCTCATTTTCTGAGCCAGATTTTTATGATGATTCCATTTGGACAGAAGCTGCTGCATCTTTGAACTTTCCTATGCTTTCAGATGCTAATAATGGTTTTTATGAAGCTGGGGATATGGCTTGGATATGCAAGGTTGATGGTGAATAA 789 0.4284 MIKARMMGTDQERKQLMRKQAQANSRKGCMRGKGGPQNATCTYKGVRQRIWGKWVAEIREPRRGSRIWLGTFNTSHEAALAYDAAARKLYGHDAKLNLPDLQPSISTTQDIQRDNLLQQQSHMMINQHNIGTSFNNNNNNNLKPLVPMAEVGVTPIYTNEGIMSLPLRDDINTYTTINNINNFNTKPIILESFRNPTKPMDNNIINNNNVEKPSSSFSEPDFYDDSIWTEAAASLNFPMLSDANNGFYEAGDMAWICKVDGE 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01632 262 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 16 184 - -
Arst6g01632 262 CDD AP2 41 101 IPR001471 GO:0003700|GO:0006355
Arst6g01632 262 SUPERFAMILY DNA-binding domain 42 100 IPR016177 GO:0003677
Arst6g01632 262 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Arst6g01632 262 Pfam AP2 domain 42 92 IPR001471 GO:0003700|GO:0006355
Arst6g01632 262 PRINTS Ethylene responsive element binding protein signature 65 81 IPR001471 GO:0003700|GO:0006355
Arst6g01632 262 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Arst6g01632 262 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Arst6g01632 262 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Arst6g01632 262 FunFam Ethylene-responsive transcription factor 2 41 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01632 Arst-Chr6 16711854 16714134 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst6g01632 AP2 4e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01632 6 16711854 16714134 Arst6g01632 6 16711854 16714134 ECH
Arst6g01632 6 16711854 16714134 Arst8g00130 8 1453992 1455324 PCT