Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g01621 ATGAGCGCATGCCCTCTCTATGGTTCCATAATCAAGCCACCATCATCATCAACAACCCTATCCCTTCTTCTTCGTAATCCTCCATTATCATGCAACTTCCCCACTCTCATTCTCAGGAACCGAAATTCCATCTTTGCCCTTCACTCATACGACGCCGTTTCTACTCAAAACGCCATTCGCTTTGACGTACAAGATTCCACCGCCACTGATTCAGCTGAGGTAGTAGTGGAACCTGCTGAAGCACCTCCATCAGACAGTGTTGTTGCTGATGCGAAACCTCAAGAGAAATTAACCAAGCTTCGGAAGAAGAAAGTACCATTTCAAGAAGACGATGACACCATCGACAACCGCTTCAAGCTCCGCAATGGACGAGAGGTATTTGAAGAGAAAGCTTATTTGGTAGGGGTAGAAAGGAAGGGAGATAATGAGGATGTGTTTGGGATAGAAGAATCTCTGAGGGAATTGGAACAGCTAGCTGACACTGCTGGCTTAATGGTTGTTGGCTCTACCTACCAGAAGCTTACTTCTCCAAACCCAAGGACATACATTGGCTCTGGAAAGGTTTCTGAAATTAAGAGTGCAATCCATGCCTTGGACGTTGAAACTGTAATTTTTGATGATGAGCTATCACCTGGGCAATTGCGCAACCTGGAAAAGGTTTTTGGTGGGGACGTGAGAGTTTGTGATCGAACTGCTCTCATCCTTGATATATTTAATCAGCGAGCAGCAACACATGAAGCATCCTTACAGGTTTCATTAGCACAAATGGAATACCAACTACCTCGTCTAACAAAAATGTGGACACATCTTGAGCGTCAATCAGGAGGAAAGGTGAAGGGAATGGGAGAAAAACAAATAGAAGTGGACAAGCGTATTTTGCGAAACCAAATTGGTGCACTTAAGAAAGAGCTAGAATCTGTTAGGAAACACCGACAGCAGTACCGTAACAGGCGTTTCTCAGTACCTGTGCCGGTGGTAGCCTTGGTTGGGTACACAAATGCTGGAAAGAGTACCCTTTTAAATCAATTAACTGGGGCAGATGTTTTTGCCGAGGATAAATTATTTGCAACTTTAGATCCAACTACAAGGAGGGTCCAGCTGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAATTGCCAACTCAACTGGTTGCTGCCTTCAGAGCTACCCTGGAGGAGATATCAGAGTCGTCACTTCTGGTGCATGTAGTTGATATCAGTCATCCCCTGGCAGAGCAACAAATAAATGCTGTTGACAAAGTTCTGTTAGAACTAGATGTATCATCTATTCCAAGATTGATGGTTTGGAACAAGGTTGATAAGGCTAGTGATCCCCAGAAAATCAGGTTAGAAGCTGAAAATAGAGATGATGTTGTATGCATATCTGCATTAACGGGTGATGGCCTACCAGAATTCTGTAACGCAGTTCAAGAAAAATTGAAGGACTCCATGGTGTGGGTTGAAGCTTTGGTACCATTTGAAAATGGAGACCTTCTCAGCACCATACACCAAGTTGGAATGGTTGAGAAAACTGAACACACAGAGCAAGGGACATATATCAAGGCACATGTGCCCCTTCGTTTTGCAAGATTGCTGACACCCATGAGGCAAATGTGTGTATCCCAATCTTAA 1650 0.4382 MSACPLYGSIIKPPSSSTTLSLLLRNPPLSCNFPTLILRNRNSIFALHSYDAVSTQNAIRFDVQDSTATDSAEVVVEPAEAPPSDSVVADAKPQEKLTKLRKKKVPFQEDDDTIDNRFKLRNGREVFEEKAYLVGVERKGDNEDVFGIEESLRELEQLADTAGLMVVGSTYQKLTSPNPRTYIGSGKVSEIKSAIHALDVETVIFDDELSPGQLRNLEKVFGGDVRVCDRTALILDIFNQRAATHEASLQVSLAQMEYQLPRLTKMWTHLERQSGGKVKGMGEKQIEVDKRILRNQIGALKKELESVRKHRQQYRNRRFSVPVPVVALVGYTNAGKSTLLNQLTGADVFAEDKLFATLDPTTRRVQLKNGKEFLLTDTVGFIQKLPTQLVAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLLELDVSSIPRLMVWNKVDKASDPQKIRLEAENRDDVVCISALTGDGLPEFCNAVQEKLKDSMVWVEALVPFENGDLLSTIHQVGMVEKTEHTEQGTYIKAHVPLRFARLLTPMRQMCVSQS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g01621 549 Gene3D - 142 241 IPR042108 -
Arst6g01621 549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 324 496 IPR027417 -
Arst6g01621 549 PRINTS GTP1/OBG GTP-binding protein family signature 326 346 IPR006073 GO:0005525
Arst6g01621 549 PRINTS GTP1/OBG GTP-binding protein family signature 393 411 IPR006073 GO:0005525
Arst6g01621 549 Pfam 50S ribosome-binding GTPase 326 444 IPR006073 GO:0005525
Arst6g01621 549 Pfam GTP-binding GTPase N-terminal 149 238 IPR025121 -
Arst6g01621 549 Hamap GTPase HflX [hflX]. 152 515 IPR016496 GO:0005525
Arst6g01621 549 NCBIfam GTPase HflX 131 486 IPR016496 GO:0005525
Arst6g01621 549 Gene3D - 323 491 IPR027417 -
Arst6g01621 549 Coils Coil 290 317 - -
Arst6g01621 549 NCBIfam small GTP-binding protein domain 325 478 IPR005225 GO:0005525
Arst6g01621 549 FunFam GTPase HflX 323 492 - -
Arst6g01621 549 Pfam HflX C-terminal domain 456 524 IPR045498 -
Arst6g01621 549 Pfam GTP-binding GTPase Middle Region 241 318 IPR032305 -
Arst6g01621 549 CDD HflX 283 486 IPR030394 GO:0005525
Arst6g01621 549 Gene3D - 242 309 - -
Arst6g01621 549 ProSiteProfiles HflX-type guanine nucleotide-binding (G) domain profile. 324 490 IPR030394 GO:0005525
Arst6g01621 549 PANTHER GTP-BINDING PROTEIN HFLX 92 533 IPR016496 GO:0005525
Arst6g01621 549 FunFam Predicted protein 143 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g01621 Arst-Chr6 16626724 16631840 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01621 6 16626724 16631840 Arst6g01621 6 16626724 16631840 ECH