Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g03414 ATGGATCCACCACCAACACAGCCACCAGCAATGCCACCACATCCATCCACCATGGCTCCCACCACTGTCATGGCTGCCACTGCCACATCAATTCAAACAAACAACCCTGACTCGGTTGAATCCTCGCCGCGCTGTCGTATCGGTGAAACATGGAATGATGAGCTTATTGTGCCGGTCCCAGGCGCCAAGCTCCGCCTCATGTGCAGCTACGGTGGCCACATCATGCCACGCCCCCATGATAAGTCCCTCAGTTACATAGGTGGTGACACTAGAATTGTGGTGGTGGATCGCAATTCAACCCTAAAGGACCTCTGTTTGCGCCTTTCCCGCACTTTACTCAATGGAAGACCCTTCACACTCAAGTACCAATTACCAAACGAGGACCTTGACAACCTCATCTCTGTCACCACTGATGAAGACCTTGACAACATGATCGAAGAGTATGATCGTGTGGCTGCAGCATCAGCATCTACCCTGAAGGCTTCACCTTCAAGACTCAGGGTGTTCCTGTTCTTCTCCAAGCCAGAGACCACTGTTTCAATGGGATCACTCCTTGATGATGCGAAATCTGAGACATGGTTCGTGGATGCGCTCAACAACTCGGGGATGCTCACAAGGGGAGTGTCAGATTCCGCAGCAGGAGAAACCATTGTAAACCTTGATGGTGTTGGCCCTGCTGTTTCAGCTAGTGGTTCAAGCAACAACTTGGAGGCTCAGGCTGCGGCAGTGGCAGAGTCTTTGGCTCTGACTGATAATATCACTGGCAACAATAACAACAATAGCAACAAGGTGAAAAATTTGCAGGATGTTGTAGCTGTGAATTCACTGCCTGGCTCACCTTCATCAGCTTCTTCTCCTTCAATGGCTAATCTCCCACCCATCCGGGTTCGTGTCGATGAAATTGGCGCAAGTGGTGTGAGGCGAGATGAAGGGTTTGTTGTTGTTCCCTCTACTGTGGCTATGCCTGCTGCAGTGCCTGCAACTATGAGTTTGGCTGCAGCAGCAATGGTTACTAGCAATAGTAGTGATATCATGAATAGGCTTATTATCTCTGAGGATGAGAGATCAGATCCTGGTGTTCCTCTTGGGTTTGGGAAGCCTCCTTTACCATTGCAACTTGTGCAACCAAGGACTGGTGGTGGTGTGAGTTTACCTTCTCCAGATTCAGTTGCAAGTGACAGTAGTAGCATTGCATCAACAAATTCTTTCTCGAAGAATGTGTACTATCAAGAACAAGTCCAACCTTCACATGTAGATAACAAAGCTCCTACCATAAGCAATGCCAAGATTGAAATTAGAGAACAAATTCAGGATCCAAATTACACATTACCTCCACAATTGGATCAAAACCAGCAACTCCACCAGCAATTTGTGCAAGCAAGCAGCCCCTACATTCACCACCCTGCGGCCGCCACCAATACAGTGCCAGTGTCATCTTACTACCCAGTTTACGCACCGCCGCCACCGCTGCCATCACAACCAACACTTCACCAGCATCCAATTCCCCAAACTCAACAACAGCAACAGTATCAACCAGTTTATGTTATGCCTGTTGGACACACACAACAACCATACAATGTAACATTGCAACACAACATTGCTGATCCTAACATGGTAGCATCAGGTAGACCACTAGTACCCCAGAGTATTGCTGCTCCTGCAGTGTCAACAACAGCATACAAAGATGGCACATTACCAATTTACCCTCCTAGGCCAAATACCCAACCACAAACTACTCAGGCATTTATTCAAATACCTTCTAGTCACTTTCAGCAACAACCACAGTATGTGGGTTTGACCCAAGTTCAGCACCATCAACCACCACCACCACCACAGCACATTGCTGTGGCTCCATCTGGTAGTGGTGGAGGTGGTGGTGCTAATTACGGCTATGAATATGGTGGTGGCACTGTGCAAGATCAAGCTGCATACTACACACAACAGCAACAAGCTACTACAGCTCCATTGACTTCTCAGTACCAATCCATGACTCCGGCGGCGGCAGCTGCGGCGCTATCGGATGTTTCGAAGCAATTCCCCAATGAAAGTCTTCAGCAGCCAAACAGAGCTACACAACCCGTATAG 2085 0.4844 MDPPPTQPPAMPPHPSTMAPTTVMAATATSIQTNNPDSVESSPRCRIGETWNDELIVPVPGAKLRLMCSYGGHIMPRPHDKSLSYIGGDTRIVVVDRNSTLKDLCLRLSRTLLNGRPFTLKYQLPNEDLDNLISVTTDEDLDNMIEEYDRVAAASASTLKASPSRLRVFLFFSKPETTVSMGSLLDDAKSETWFVDALNNSGMLTRGVSDSAAGETIVNLDGVGPAVSASGSSNNLEAQAAAVAESLALTDNITGNNNNNSNKVKNLQDVVAVNSLPGSPSSASSPSMANLPPIRVRVDEIGASGVRRDEGFVVVPSTVAMPAAVPATMSLAAAAMVTSNSSDIMNRLIISEDERSDPGVPLGFGKPPLPLQLVQPRTGGGVSLPSPDSVASDSSSIASTNSFSKNVYYQEQVQPSHVDNKAPTISNAKIEIREQIQDPNYTLPPQLDQNQQLHQQFVQASSPYIHHPAAATNTVPVSSYYPVYAPPPPLPSQPTLHQHPIPQTQQQQQYQPVYVMPVGHTQQPYNVTLQHNIADPNMVASGRPLVPQSIAAPAVSTTAYKDGTLPIYPPRPNTQPQTTQAFIQIPSSHFQQQPQYVGLTQVQHHQPPPPPQHIAVAPSGSGGGGGANYGYEYGGGTVQDQAAYYTQQQQATTAPLTSQYQSMTPAAAAAALSDVSKQFPNESLQQPNRATQPV 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g03414 694 SMART PB1_new 78 173 IPR000270 GO:0005515
Arst5g03414 694 PANTHER OS05G0427100 PROTEIN-RELATED 35 557 - -
Arst5g03414 694 Pfam PB1 domain 79 171 IPR000270 GO:0005515
Arst5g03414 694 CDD PB1_UP2 67 171 - -
Arst5g03414 694 SUPERFAMILY CAD & PB1 domains 79 182 - -
Arst5g03414 694 Gene3D - 84 171 - -
Arst5g03414 694 MobiDBLite consensus disorder prediction 376 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g03414 Arst-Chr5 93062483 93065227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g03414 63 200 MAP Kinase Kinase Kinase AT5G57610 44.286 4.27e-27 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03619 9 112480831 112483411 Arst5g03414 5 93062483 93065227 ECH
Arst5g03414 5 93062483 93065227 Arst5g03414 5 93062483 93065227 ECH