Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g01093 ATGGAAACCAGCTCGGTTTCCAAGTTGGTGCTTTCGTTGTTGTTTTGGTCAGCATTATTGTGGGTGGTTGAGTCAAGTGTAAGCTATGACAGGAAGGCCATTCTCATCAATGGCCAAAGGAGAATCCTTTTCTCTGGCTCCATACATTATCCCAGAAGTACCCCTGATATGTGGGAAGATCTGATTCAGAAGGCCAAAGAGGGAGGCATTGATGTCATTGAAACCTACGTCTTTTGGAATGTTCATGAGCCTTCTCCTGGCAATTACAATTTCGAAGGAAGGTATGATCTGGTGAGGTTCGTGAAGACAATACAGAAAGCAGGGCTATATGCTCACCTTCGCATTGGACCTTATGTCTGTGCTGAATGGAACTTTGGAGGATTTCCTGTTTGGCTGAAGTATGTTCCTGGTATAAGTTTCAGAACAGACAATGAACCCTTCAAGAGGGCAATGCAAGGGTTCACTGAGAAGATTGTGGGAATGATGAAGAGTGAACGTCTCTATGAATCTCAGGGTGGTCCTATCATACTCTCTCAGATTGAGAATGAGTATGGGGCACAGAGTAAAATGCTTGGACCAGCTGGCCAAAATTATGTGAACTGGGCTGCAAAAATGGCTGTCGAAATGGGAACTGGGGTCCCATGGATTATGTGCAAGGAAGATGATGCTCCGGATCCAGTGATAAACACTTGCAATGGCTTTTACTGTGATAAATTTACTCCCAATAGACCCTATAAGCCTACAATGTGGACCGAGGCTTGGAGTGGCTGGTTTTCAGAATTTGGTGGTACAATTCACCAAAGACCTGTCCAAGATTTAGCATTTGCTGTTGCCCGATTTATACAAAAAGGAGGATCCTTTGTAAACTACTACATGTATCATGGAGGAACCAATTTTGGCCGAACGGCCGGAGGCCCTTTCATCACTACCAGCTATGACTATGATGCTCCACTGGATGAATATGGATTGATCAGACAACCAAAATATGGTCATTTAAAGGAGCTTCACAAGGCTATCAAGATGTGTGAGCGAGCTTTAGTTTCAACTGATGCTGTTGTTACATCATTAGGGAGCTTCCAACAGGCTTCTGTATATTCTACAGAATCAGGAGATTGTGCTGCTTTTCTCTCAAACTATGATTCAAACTCTGCTGTTAGAGTCATGTTCAATAATATGCACTACAATCTACCTCCTTGGTCCGTCAGCATCCTCCCCGATTGTAGAAATGTCGTCTTTAATACAGCAAAAGTTGGAGTGCAAACATCTCAAATGCAAATGATGCCCACAAGCACTCAAATGTTCTTGTGGGAGAGTTTTGATGAAGATCCTTCTTCTATGGATGACAGCTCCACAATTACTGCTTCTGGTCTCTTGGAACAAATAAATGTTACACGGGATACAAGTGATTACCTTTGGTATACAACTAGTATTGATATAGGTTCATCTGAGTCTTTCCTCCATGGAGGTGAACTCCCAACTCTCATTGTTCAGTCCACAGGCCACGCTGTACATGTATTTATCAATGGTCAACTATCTGGCTCTGCCTATGGAACAAGAGAGGATAGGAGATTCACATATATTGGGAAAGTAAACCTCCGTGCTGGAACAAACAAAATATCACTGCTCAGCATTGCTGTTGGACTTCCAAATGTGGGAGGACATTTTGAGACATGGAACACAGGAATCCTAGGTCCAGTTGCACTCCATGGACTTGACCAGGGAAAGTGGGACTTGTCTTGGCAGAAATGGACTTATCAGGTTGGTCTGCAAGGAGAGGCCATGAATCTTGCATCTCCAACTGGAATCTCTTCTGTTGAGTGGATGGAGACAGCAATAGTGGTGCAGAAAAAGCAGCCATTGACATGGCACAAGACTTACTTCGATGCTCCTGAAGGAGATGAGCCATTGGCATTGGACATGAAGGATATGGGTAAAGGTCAAATATGGATCAATGGTCAAAGCATTGGAAGATACTGGACTACTTCAGCTGCTGGCAATTGCAGTGACTGCAACTATGCTGGCTCTTTCAGACCTCCAAAGTGCCAGCTCGGTTGCGGCCAACCGACTCAGCGATGGTACCATGTTCCTCGATCTTGGTTAAAGCCAAATCATAACCTGTTGGTTGTTTTCGAGGAACTCGGGGGCAACCCTTCGAGTATTTCACTTGTGAAGAGATCAGTGAGCAGTGTGTGTGCTGATGTGTCAGAGTATCACCCAAATATCAAGAACTGGCACATTGAGAGCTATGGCAAGTCTCAAGAGTTCCATGCTCCCAAGGTTCACTTACATTGTAGTCCTGGGCAGGCCATTACTTCCATCAAATTTGCAAGCTTTGGAACACCTTTCGGCACTTGTGGCAACTATGAGAAGGGAGTTTGTCATTCTCCTGAATCCTATGCCATCTTGGAGAAGAAATGCATAGGAAAGTCAAGATGCACAATCACAGTTGCAAACAGCAACTTCGGTCAAGATCCATGCCCCAATGTGATGAAGCGGTTATCAGTTGAAGCTGTTTGCTCTCCATCTGCCATCAATTAG 2538 0.4433 METSSVSKLVLSLLFWSALLWVVESSVSYDRKAILINGQRRILFSGSIHYPRSTPDMWEDLIQKAKEGGIDVIETYVFWNVHEPSPGNYNFEGRYDLVRFVKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNEPFKRAMQGFTEKIVGMMKSERLYESQGGPIILSQIENEYGAQSKMLGPAGQNYVNWAAKMAVEMGTGVPWIMCKEDDAPDPVINTCNGFYCDKFTPNRPYKPTMWTEAWSGWFSEFGGTIHQRPVQDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFITTSYDYDAPLDEYGLIRQPKYGHLKELHKAIKMCERALVSTDAVVTSLGSFQQASVYSTESGDCAAFLSNYDSNSAVRVMFNNMHYNLPPWSVSILPDCRNVVFNTAKVGVQTSQMQMMPTSTQMFLWESFDEDPSSMDDSSTITASGLLEQINVTRDTSDYLWYTTSIDIGSSESFLHGGELPTLIVQSTGHAVHVFINGQLSGSAYGTREDRRFTYIGKVNLRAGTNKISLLSIAVGLPNVGGHFETWNTGILGPVALHGLDQGKWDLSWQKWTYQVGLQGEAMNLASPTGISSVEWMETAIVVQKKQPLTWHKTYFDAPEGDEPLALDMKDMGKGQIWINGQSIGRYWTTSAAGNCSDCNYAGSFRPPKCQLGCGQPTQRWYHVPRSWLKPNHNLLVVFEELGGNPSSISLVKRSVSSVCADVSEYHPNIKNWHIESYGKSQEFHAPKVHLHCSPGQAITSIKFASFGTPFGTCGNYEKGVCHSPESYAILEKKCIGKSRCTITVANSNFGQDPCPNVMKRLSVEAVCSPSAIN 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g01093 845 FunFam Beta-galactosidase 590 731 - -
Arst5g01093 845 SUPERFAMILY (Trans)glycosidases 26 343 IPR017853 -
Arst5g01093 845 Gene3D Glycosidases 22 343 - -
Arst5g01093 845 Gene3D - 431 580 - -
Arst5g01093 845 SUPERFAMILY Galactose-binding domain-like 401 572 IPR008979 -
Arst5g01093 845 SUPERFAMILY Galactose-binding domain-like 581 746 IPR008979 -
Arst5g01093 845 ProSiteProfiles SUEL-type lectin domain profile. 758 840 IPR000922 GO:0030246
Arst5g01093 845 CDD Gal_Rha_Lectin_BGal 758 839 - -
Arst5g01093 845 PRINTS Glycosyl hydrolase family 35 signature 286 301 IPR001944 GO:0004553|GO:0005975
Arst5g01093 845 PRINTS Glycosyl hydrolase family 35 signature 58 76 IPR001944 GO:0004553|GO:0005975
Arst5g01093 845 PRINTS Glycosyl hydrolase family 35 signature 249 264 IPR001944 GO:0004553|GO:0005975
Arst5g01093 845 PRINTS Glycosyl hydrolase family 35 signature 113 132 IPR001944 GO:0004553|GO:0005975
Arst5g01093 845 PRINTS Glycosyl hydrolase family 35 signature 306 322 IPR001944 GO:0004553|GO:0005975
Arst5g01093 845 PRINTS Glycosyl hydrolase family 35 signature 37 54 IPR001944 GO:0004553|GO:0005975
Arst5g01093 845 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Arst5g01093 845 PRINTS Glycosyl hydrolase family 35 signature 170 185 IPR001944 GO:0004553|GO:0005975
Arst5g01093 845 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Arst5g01093 845 PANTHER BETA-GALACTOSIDASE RELATED 19 741 IPR001944 GO:0004553|GO:0005975
Arst5g01093 845 FunFam Beta-galactosidase 751 842 - -
Arst5g01093 845 Pfam Beta-sandwich domain in beta galactosidase 346 417 IPR041392 -
Arst5g01093 845 FunFam Beta-galactosidase 445 582 - -
Arst5g01093 845 FunFam Beta-galactosidase 291 419 - -
Arst5g01093 845 Pfam Glycosyl hydrolases family 35 34 338 IPR031330 -
Arst5g01093 845 FunFam Beta-galactosidase 22 342 - -
Arst5g01093 845 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 172 184 IPR019801 GO:0004553|GO:0005975
Arst5g01093 845 Gene3D - 603 732 - -
Arst5g01093 845 Pfam Galactose binding lectin domain 762 839 IPR000922 GO:0030246
Arst5g01093 845 Gene3D - 748 845 IPR043159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g01093 Arst-Chr5 10854252 10859922 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g01629 6 16697297 16702577 Arst5g01093 5 10854252 10859922 ECH
Arst5g01093 5 10854252 10859922 Arst5g01093 5 10854252 10859922 ECH