Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00895 ATGATTCAAGAGCTCTTCGCTGGTGCTGGCTTTGTAGCACCTCCTGACAAGAAATACTCCATTAACAACAACAATCTTATTAGTAATAATGGAGGTGGAGGAGGAGGAGGAGGAGGACTTCTCTTACCACCAACACCACCACCTTCTTCTTCTTCTTCTTCTACACCTACTTCTACGGTTGTGGCCGCCACCTCATCAACTAGTTCGGAGAATCTGAGGTGTCCGCGATGCGATTCATCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCATTTCTGCAAGACATGCCGAAGGTACTGGACCAAAGGTGGTGCTCTCAGGAACGTCCCCATCGGCGGTGGCTGCCGGAAAAACAAGAACATCGGTGTCTCCAACTCCTCAGCGGCAAAGGCTGCAAGCACCACCCCGAAGATGAAAGCTATGGTGGCATCAGAGCTCAGAAGATCATCATCATCGCCACTTGGAATCGACCACCACGATCTTCCAGCAGGACCAATCCTATGGGGATCTCCACAGAATAGTCATCTATTGGCGTTACTCCGAGCTGGCCAGAGCCAAAACCCTAACCCTAACCCTAACTCTATGCTCATGAACGGTGTTTCAGTGAAGGAAGAACGGAACTACAACATGGTGAGTAGTACTGCAGTAGAGCCATTGATGATGAATAATAATATTCCAAGAACAACCCTAGGCTATGATGGAGTTGGAGTTGGACACATTCCTCAATTGGATCTGTGCAGCTCTTTGTGGAGAAGCAATAATAATAACAATCAAGATCATCAACCTGCAGCAGCTGCTACTTCCTTTCTACTTTCTGAACAACACCAAACCAGTAGCAATGGAATTCAACAACTTTATCACAAACTCAGGTCAACACCTAATAACTATGCCACTCACAATAATTCATCGCCAATCTTCATGCCAAACATGGCTGCTTCTTCTTCTTCTTCTTCTTTATCCACCATTTTGGAGTCATCTTCGGTTTCCACCGCTGAATTGGGCTGCTGGAATAATCCAACCCTTCCCTGGCTTTCTGATCTTCCTGCTGCAACCAATGGTGCATACCCTAATTAA 1092 0.4643 MIQELFAGAGFVAPPDKKYSINNNNLISNNGGGGGGGGGLLLPPTPPPSSSSSSTPTSTVVAATSSTSSENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKNIGVSNSSAAKAASTTPKMKAMVASELRRSSSSPLGIDHHDLPAGPILWGSPQNSHLLALLRAGQSQNPNPNPNSMLMNGVSVKEERNYNMVSSTAVEPLMMNNNIPRTTLGYDGVGVGHIPQLDLCSSLWRSNNNNNQDHQPAAAATSFLLSEQHQTSSNGIQQLYHKLRSTPNNYATHNNSSPIFMPNMAASSSSSSLSTILESSSVSTAELGCWNNPTLPWLSDLPAATNGAYPN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00895 363 ProSiteProfiles Zinc finger Dof-type profile. 72 126 IPR003851 GO:0003677|GO:0006355
Arst5g00895 363 Pfam Dof domain, zinc finger 71 126 IPR003851 GO:0003677|GO:0006355
Arst5g00895 363 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 64 289 IPR045174 GO:0003700|GO:0006355
Arst5g00895 363 MobiDBLite consensus disorder prediction 32 65 - -
Arst5g00895 363 ProSitePatterns Zinc finger Dof-type signature. 74 110 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00895 Arst-Chr5 8413492 8415027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00895 39 143 C2C2-Dof Transcription Factor Family AT5G60200 57.143 3.90e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst5g00895 zf-Dof 1.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00895 - - adu:107487764 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00895 5 8413492 8415027 Arst5g00895 5 8413492 8415027 ECH