Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00815 ATGAAACAAACAACAAACAATGCAACAAACACAAACACCTTATCTGCTTTGAACATGAACATGCCTCACACACAAGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGATGATGATTCTCCCTCCTTCTTCGATGCTCTTCTCTGCGAAGAAGAGAAGAACATTCTCGATGATGATGATGACAACCACCAAAGCAGCCTTCTCATGGACAATCGGGAACACGACCACATCCTCTCTCTTCTCTCCAAAGAGACACACACTCACACCATTCATGCTTTTCTCGAGGCTCCACGAAACGACGCCGTCTCCTGGATTTCCAAAGTTAGCTGCTTCTATGGCTTCACTCCTTTGACCACTGTACTTGCAGTCAACTACTTCGACAGGTTCGTCACAAGCCTAACGTTTCAGAGGGACAAGCCATGGATGACTCAGCTCACTGCTCTTGCCTGTTTATCTCTTGCTGCCAAAATGGAAGAGATCCATGTCCCACTTCTCTTAGACCTCCAAGTGGAGGAACCCAAGTTCTTGTTCGAAGCCAAGACTGTTCAGAGAATGGAGCTTCTTGTGTTGTCTACACTCCAATGGAGGATGAACCCTGTCACCCCAATTTCCTTCTTTGAACACATTGTTAGAAGGATTGGTTTGCATTGGGAGTTCTTATGGAGGTGCCAGCGTGTTCTTCTTTCTGTCATTCCCAATTCAAGGTTCATGGGTTATCTCCCTTCTACATTGGCTGCTGCTACCATGATCCATGTTATTAAAGAGATTGAACCGTTAAATGCAATGGAATACATAAATCAACTCATGGGGTTACTCAAGACTAGTGAGGAACAAGTGAATGAGTGCTACAAACACATAGTGAAACAATTGGTTTTGAATCATGAAGGCATTTACAATGTTTGCCAAAAACGCAAACGGATATCCGAACCAAGTAGCCCCGGGGGTGTAATTGATGCATCATTCAGTTGTGACAGCTCAAATGATTCATGGACAGCAGCATCTTTGATCTCTCCTTCACTATCAATGGAGCCAATGTTTAAGAGGAGCAGAGCTCCGGACCAGCAGATGCGATTCGCCACAGTAAATCGAGTGTCTATCAATGTTATAGATAGTCCTCCTTAA 1149 0.4386 MKQTTNNATNTNTLSALNMNMPHTQEDEEEEEEEEEEEEEEEEEEDDDSPSFFDALLCEEEKNILDDDDDNHQSSLLMDNREHDHILSLLSKETHTHTIHAFLEAPRNDAVSWISKVSCFYGFTPLTTVLAVNYFDRFVTSLTFQRDKPWMTQLTALACLSLAAKMEEIHVPLLLDLQVEEPKFLFEAKTVQRMELLVLSTLQWRMNPVTPISFFEHIVRRIGLHWEFLWRCQRVLLSVIPNSRFMGYLPSTLAAATMIHVIKEIEPLNAMEYINQLMGLLKTSEEQVNECYKHIVKQLVLNHEGIYNVCQKRKRISEPSSPGGVIDASFSCDSSNDSWTAASLISPSLSMEPMFKRSRAPDQQMRFATVNRVSINVIDSPP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00815 382 SUPERFAMILY Cyclin-like 79 207 IPR036915 -
Arst5g00815 382 SUPERFAMILY Cyclin-like 210 305 IPR036915 -
Arst5g00815 382 MobiDBLite consensus disorder prediction 1 22 - -
Arst5g00815 382 CDD CYCLIN_AtCycD-like_rpt1 107 204 - -
Arst5g00815 382 CDD CYCLIN_AtCycD-like_rpt2 209 293 - -
Arst5g00815 382 SMART cyclin_7 112 200 IPR013763 -
Arst5g00815 382 Gene3D - 104 207 - -
Arst5g00815 382 Pfam Cyclin, C-terminal domain 209 307 IPR004367 -
Arst5g00815 382 Coils Coil 21 49 - -
Arst5g00815 382 SMART Cyclin_C_2 209 322 IPR004367 -
Arst5g00815 382 PANTHER CYCLINS 37 300 IPR039361 -
Arst5g00815 382 Gene3D - 208 295 - -
Arst5g00815 382 MobiDBLite consensus disorder prediction 25 50 - -
Arst5g00815 382 Pfam Cyclin, N-terminal domain 105 207 IPR006671 -
Arst5g00815 382 MobiDBLite consensus disorder prediction 1 50 - -
Arst5g00815 382 FunFam CYCLIN D32 208 293 - -
Arst5g00815 382 FunFam D6-type cyclin 91 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00815 Arst-Chr5 7219276 7221162 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00815 39 372 Core Cell Cycle Gene Families AT5G67260 47.541 6.98e-101 303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00815 5 7219276 7221162 Arst1g01390 1 15613560 15615777 ECH
Arst8g01353 8 18341402 18342686 Arst5g00815 5 7219276 7221162 ECH
Arst6g04066 6 108849227 108851924 Arst5g00815 5 7219276 7221162 ECH
Arst5g00815 5 7219276 7221162 Arst5g00815 5 7219276 7221162 ECH
Arst5g00815 5 7219276 7221162 Arst9g03541 9 111894700 111896599 PCT
Arst1g01390 1 15613560 15615777 Arst5g00815 5 7219276 7221162 PCT