Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g03813 ATGGTGAAGATTTGCTGCATTGGTGCTGGATATGTTGGGGGTCCTACAATGGCAGTCATTGCACTGAAGTGCCCATCCATTGAAGTCGCCGTTGTCGATATCTCCAAACCTCGTATTGCAGCCTGGAATAGCGACCAGCTACCCATCTATGAGCCCGGCCTTGCCGGCAAAGCAGCCGATTTGACCTATTGGGAGAGCGCTGCTCGCATGATTGCTGATGTCTCAAAGTCAGACAAAATCGTTGTTGAGAAATCCACTGTCCCTGTCAAGACAGCTGAGGCTATAGAGAAAATTTTGACTCACAATAGCAAGGGAATCAAGTTCCAGATCCTGTCAAACCCGGAATTCCTTGCCGAGGGAACTGCAATTGAAGACCTTTTCAAGCCAGACCGTGTCCTTATCGGTGGCCGGGAGACCCCAGAAGGCCAGAAAGCTCTCCAAACATTGAAGGAAGTTTATGCTCACTGGGTCCCTGAAGAGAGAATCCTAACCACTAACCTGTGGTCTGCTGAGCTGTCTAAGCTTGCTGCCAATGCCTTCTTGGCACAGAGGATTTCATCTGTTAATGCAATGTCGGCGCTTTGTGAGGCTACCGGGGCAAATATCCAGCAGGTGTCCTTTGCTGTGGGTACTGACACAAGAATTGGACCCAAGTTCCTCAATGCCAGTGTTGGATTTGGTGGATCCTGCTTCCAGAAGGATATCCTGAACCTTGTCTACATCTGTGAGTGCAACGGCCTTCCTGAGGTGGCCGAGTACTGGAAGCAAGTCATCAAGATCAATGATTACCAGAAGAGCCGGTTCGTGAACCGTGTAGTCTCATCAATGTTCAACACTGTCTCAAGCAAGAAGGTTGCCATTCTTGGATTTGCCTTCAAGAAAGATACCGGTGACACAAGGGAGACTCCGGCCATTGACGTGTGCAAGGGGCTACTTGGCGACAAGGCCAACCTAAGCATATATGATCCACAGGTAACTGAGGACCAAATCCAGAGGGATCTGTCGATGAACAAGTTCGATTGGGACCATCCGATCCACTTGCAGCCGACTAGTCCTTCTACCGTGAAGAAAGTGAGTGTGGTTTGGGATGCATATGAAGCCACAAAGGATGCACATGGAATCTGCATTCTTACTGAGTGGGATGAGTTCAAGACCCTTGATTACCAGAGGATCTATGAGAACATGCAGAAGCCAGCATTTGTTTTTGATGGAAGAAACATCGTTGATGCTGATAAGTTGCGTGATATTGGATTCATTGTTTACTCAATTGGTAAGCCACTTGATGCTTGGCTCAAGGACATGCCTGCTGTGGTGGCATAG 1320 0.4856 MVKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISKPRIAAWNSDQLPIYEPGLEXGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIEDLFKPDRVLIGGRETPEGQKALQTLKEVYAHWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANIQQVSFAVGTDTRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKSRFVNRVVSSMFNTVSSKKVAILGFAFKKDTGDTRETPAIDVCKGLLGDKANLSIYDPQVTEDQIQRDLSMNKFDWDHPIHLQPTSPSTVKKVSVVWDAYEATKDAHGICILTEWDEFKTLDYQRIYENMQKPAFVFDGRNIVDADKLRDIGFIVYSIGKPLDAWLKDMPAVVA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g03813 440 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 287 410 IPR014027 GO:0016616|GO:0051287
Arst4g03813 440 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 169 263 IPR014026 GO:0016616|GO:0051287
Arst4g03813 440 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 56 144 IPR001732 GO:0016616|GO:0051287
Arst4g03813 440 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 55 IPR001732 GO:0016616|GO:0051287
Arst4g03813 440 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 173 IPR036291 -
Arst4g03813 440 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 169 268 IPR008927 -
Arst4g03813 440 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 56 437 IPR028356 GO:0003979
Arst4g03813 440 Gene3D - 200 437 - -
Arst4g03813 440 Gene3D - 57 167 - -
Arst4g03813 440 Gene3D - 1 56 - -
Arst4g03813 440 FunFam UDP-glucose 6-dehydrogenase 168 199 - -
Arst4g03813 440 FunFam UDP-glucose 6-dehydrogenase 200 437 - -
Arst4g03813 440 Gene3D - 168 199 - -
Arst4g03813 440 SMART UDPG_MGDP_dh_C_a_2_a 287 411 IPR014027 GO:0016616|GO:0051287
Arst4g03813 440 NCBIfam nucleotide sugar dehydrogenase 57 407 IPR017476 GO:0016616
Arst4g03813 440 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 274 422 IPR036220 -
Arst4g03813 440 PIRSF UDPglc_GDPman_dh 55 426 IPR017476 GO:0016616
Arst4g03813 440 PIRSF UDPglc_GDPman_dh 2 57 IPR017476 GO:0016616
Arst4g03813 440 PIRSF UDPglc_DH_euk 1 56 IPR028356 GO:0003979
Arst4g03813 440 PIRSF UDPglc_DH_euk 55 439 IPR028356 GO:0003979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g03813 Arst-Chr4 116944117 116946901 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03813 4 116944117 116946901 Arst4g03813 4 116944117 116946901 ECH
Arst4g03813 4 116944117 116946901 Arst1g04169 1 103893395 103895987 ECH
Arst3g05203 3 127352723 127354911 Arst4g03813 4 116944117 116946901 ECH
Arst10g03085 10 99036011 99038864 Arst4g03813 4 116944117 116946901 PCT