Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g02116 ATGGTTTATACTTCCATCCCAGCATATATTGATCCAGTCAATTGGCATCAGCAACAGCAACCAAATCATCAACAAAACAACACAGGTGGCACAAGCTCTCAACTTCTTCATCCTCCACCACCACCTCTTCCGCCATCGACTCAACAACATGGAGCCAGTACTAGCTCCATCAGACCTGGGTCGATGGCGGACAGGGCAAGGATGGCTAACATACCCATGCAAGAGCCAGCACAAAAGTGTCCAAGATGTGAATCTACCAACACAAAGTTTTGCTACTTCAACAACTACAGCCTCTCTCAGCCCCGGCACTTCTGCAAGACCTGCCGGAGGTACTGGACCCGAGGCGGCGCTTTGAGAAATGTTCCGGTCGGCGGCGGCTGCCGGAGGAACAAGAGGACTAAAGGAACAACCACCAGCAACAACGGCTCCAAGTCACCACCACCGAGCTCTGATCGCGGAGGTCCCACCGTCTCTGGTGGCAGCTTTGCCTCTGAAATCGCAGGCCTAAGCCCTCCGGTGCCCTCGTCGCTGAGATTCATGGCTCCATTAATGCATCATCAGCAACTTGGAGATCACTTTTCAGGAGTTGGTGGCGGTGATTTAGGCCTAAACTACGCCGCAATTTCTGGTCCAATGGGAGGAATGGGTGACTTAAATTTTCACATAGGAAGTGCTTTGCGCAGTGATGTCACCGGTGGCGGCAATGGAGGCAGTTCTCTTCTATCAGCTGCAGGTTTGGAACAATGGAGGGTTCCACAAACACAACAATTTTCTTTCTTGACAGGTTTCGAAGCTTCATCACATGGCCTATACCAATTTGAAAATAGTACTAGTGAGGGTTCTGGATACGGCGGAGGCAGCAGTGGTGGTGGCGGTGCTATTCGGCCGAATAAGGTGTCGACTTTTGCCTCAGTAGTGAAGATGGAAGAAAGTAATAATAATTTGCCAAGGCAGTTTTTGGGGATGAATAATAATTCATCAAGTAATAGTGAGCATTTTGTTCCTGCTTCTTGGACACACCTTTCTGGTTTTACTTCTTCCAATACTACCAATAATCCTCCATAG 1065 0.4911 MVYTSIPAYIDPVNWHQQQQPNHQQNNTGGTSSQLLHPPPPPLPPSTQQHGASTSSIRPGSMADRARMANIPMQEPAQKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTKGTTTSNNGSKSPPPSSDRGGPTVSGGSFASEIAGLSPPVPSSLRFMAPLMHHQQLGDHFSGVGGGDLGLNYAAISGPMGGMGDLNFHIGSALRSDVTGGGNGGSSLLSAAGLEQWRVPQTQQFSFLTGFEASSHGLYQFENSTSEGSGYGGGSSGGGGAIRPNKVSTFASVVKMEESNNNLPRQFLGMNNNSSSNSEHFVPASWTHLSGFTSSNTTNNPP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g02116 354 ProSitePatterns Zinc finger Dof-type signature. 80 116 IPR003851 GO:0003677|GO:0006355
Arst4g02116 354 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 49 252 IPR045174 GO:0003700|GO:0006355
Arst4g02116 354 MobiDBLite consensus disorder prediction 17 59 - -
Arst4g02116 354 ProSiteProfiles Zinc finger Dof-type profile. 78 132 IPR003851 GO:0003677|GO:0006355
Arst4g02116 354 MobiDBLite consensus disorder prediction 17 34 - -
Arst4g02116 354 MobiDBLite consensus disorder prediction 119 165 - -
Arst4g02116 354 Pfam Dof domain, zinc finger 77 132 IPR003851 GO:0003677|GO:0006355
Arst4g02116 354 MobiDBLite consensus disorder prediction 131 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g02116 Arst-Chr4 66627913 66629715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g02116 1 274 C2C2-Dof Transcription Factor Family AT2G37590 41.158 1.61e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst4g02116 zf-Dof 8.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g02116 - - gmx:100796820 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g02116 4 66627913 66629715 Arst4g02116 4 66627913 66629715 ECH
Arst4g02116 4 66627913 66629715 Arst2g02221 2 72466863 72468867 PCT