Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01520 ATGATGAGATTTTTAATCTCATTCTTACCCTTTTTCTTCTTGGTGGTGGTACTACAAGAAGCCACTTGCTTCAATCAACACAAAGAACTTTCTCATAATATTAGAAACAAACTCAAGGGTAGATTGGCCATTTCCCTCTCTCATTCACCATCACAAACGGCAAAGGCAAGAAGCAGAGTGGTGTACCCGGCGGAGTATGGCGCAGACACGAGCGGAGCACGTGACAGCAGCGACGCAATTATAAAGGCATTGGAGGATGCATTCAGTTTGGAGAGTGAGGCGGAGCTGCTTCCGGGGGTTAAAGACCTTGGGGGTGTATTGGTGGACCTGCAAGGTGGGAACTACACAATTAGCAAGCCCATCAAATTCCCTTCTTCTGCTGCTGGCAATCTTGTGGTACAAGGAGGAACGTTGAGAGCTTCTGATGCATTTCCCACTGATCGCCATCTAGTTGAGTTATGGGCATCTAGTTCCCAAAAGCTCTCAAAAACAGCATCATTTGATGACTTGTACAACAAGAAACTTCAGCAACCTAAAGGGATTTACTACGAAGACATAACATTCCGGGACATTCTATTCGATTCGGGCTACCATGGAGGAGGAATTTTTGTAGTTGATTCCGCTAGGATCCGAATCAACAACTGTTTCTTCCTCCATTTCACTACAGAGGGAATCCTAGTCCAAGGTGGCCACGAAACTTACATATCTAGCTGCTTTCTTGGGCAACACTCAACCGTAGGCGGGGACTCCGGCGAGCGACAATTCTCGGGAACTGCGATTGAACTTGCTAGCAATGATAACGCAATCACCGATATTGCGATCTTCTTCTCCGTAGGGATTGTCCTAAGGGGCCAAGCCAACATCGTTACCGGGGTCCATTGTTACAATAAGGCCACCGGTTTTGGTGGCATAGGAATCTTGGTAATGCTAGCCGGAAATTCACAAACAAGAATTGATAATTGTTACATGGATTACACAGCAATTGTGATGGAAGACCCTGTTCAAGTTCATGTCACTAATGGATTTTTCTTGGGGGATGCTAACATTGTTTTGAAATCAATTAAGGGACAAATATCAGGATTGAAGATAGTCAATAATATGTTCACTGGGAACCCTAACGCTAAAGTTCCAATTGTGGCATTAGATGGAGTGTTTGGTAACGTTGACCAGGTGGTCATTGATTTGAACAGTGTTGATGGAATGGGGTTGAGATCAACGGTTGGGAAGCAATCTGTGGCTGGGAATGGAACAAAATGGGTGGCTGATTTTTCAGGGGTTTTGGTGTTCCCTAATAGGATAAATCACATTCAATATTCATTTTATTCTCAGGGGGGACCTAATAATAATAACAATAATAAGTTTGTACCACATGCAGTGACCAATGTTACAAATAATGTCGTGGTTGTGGAAAGTGATAAACCGGTTAATGGGGTTGTTTCATTCCTAGTTGAGCAATGA 1458 0.4369 MMRFLISFLPFFFLVVVLQEATCFNQHKELSHNIRNKLKGRLAISLSHSPSQTAKARSRVVYPAEYGADTSGARDSSDAIIKALEDAFSLESEAELLPGVKDLGGVLVDLQGGNYTISKPIKFPSSAAGNLVVQGGTLRASDAFPTDRHLVELWASSSQKLSKTASFDDLYNKKLQQPKGIYYEDITFRDILFDSGYHGGGIFVVDSARIRINNCFFLHFTTEGILVQGGHETYISSCFLGQHSTVGGDSGERQFSGTAIELASNDNAITDIAIFSXSVGIVLRGQANIVTGVHCYNKATGFGGIGILVMLAGNSQTRIDNCYMDYTAIVMEDPVQVHVTNGFFLGDANIVLKSIKGQISGLKIVNNMFTGNPNAKVPIVALDGVFGNVDQVVIDLNSVDGMGLRSTVGKQSVAGNGTKWVADFSGVLVFPNRINHIQYSFYSQGGPNNNNNNKFVPHAVTNVTNNVVVVESDKPVNGVVSFLVEQ 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01520 486 Gene3D - 64 480 IPR012334 -
Arst4g01520 486 SUPERFAMILY Pectin lyase-like 1 281 IPR011050 -
Arst4g01520 486 PANTHER POLYGALACTURONASE QRT3 14 486 IPR039279 GO:0004650
Arst4g01520 486 FunFam Polygalacturonase QRT3 63 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01520 Arst-Chr4 20668913 20670898 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01520 4 20668913 20670898 Arst4g01520 4 20668913 20670898 ECH