Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01517 ATGGCCACACATCTAGAATGCTTCTTCCTCAAACTTGAGCCCCTTCTCACAATGGCAAGAACATTTCTAGTTTGGTTCTTGTGTCTTGGGGTGCCTTGTTTCTTTGTAATTATTGATGGTGGAGTTTATGGAGATCATCAGAACTTGCATCCAAGAACCATTTCTGGTGCCAATCACTACCATAAAGATATAAGAAGATTACAAGCCTTTAAGGCCTCTCTTACTAGACATGCTTCTGTTGCTTCAACACCTTCTTCATTTTCATCCTCTTCTGCTTCTTCCCCTTTGCTATCTGAGGGTGTGAACAATCCACGTGTATACCACGTGACATCGTATGGGGCAGATCCAAGTGGGAATTCAGACAGCACAGAAGCAATTCTTGCAGCCATAGCAGATGCAGCCAAGGTTCCAAGTCAAGGACAGTTGATGCAGGGCATCACTGATCTTGGAGGTGTCCATGTTGATCTTGAGGGTGGTAGCTACCTCATCAGCCGTCCACTGCGCTTGCCGGCCGCCCGTCTAGGGAACCTCATGATACATGGTGGAACTATAAGAGCCTCAAATAACTTTCCAGAAGATGGGTACCTCATTGATTTGTCATCAACCTCTTCTTCTTCTTCTTCTTCTAATAATAATAATAATAATAATAATAATAATGAGAACAATGGAGCTAACTCAGAGAGTTCCCGTTCTTCACGCTACAATTTTGAGTACATAAGCTTCAAGGACCTCTTGTTAGACTCAAACTTCAGAGGTGGGGGCATTTCAGTAATTAACTCACTCAGAACTAACATAGACAACTGTTACATTACACACTTCACCACAAATGGAATTTTAGTCCAAAGTGGTCATGAGACATACATTAGAAACACTTTTCTTGGCCAGTACGTAACCGCAGGAGGTGATAAAAATGAAAAGAATTTCTCCGGGACCGGAATAAGTCTCCTCGGCAACGATAACGCCGTCACGGATGTTGTCATTTTCTCTGCAGCTATAGGAATAATGGTAACCGGTCAGGCCAACACGTTCTCCGGCGTGCATTGTTACAATAAGGCCACCGGATTTGGAGGGACCGGGATATATCTGAAGCTGCCGGGGCTAACACAGACAAGGATTGTGAATTCTTACATGGATTACACGAGTATCGTCGCCGAGGATCCGGTCCAGCTCCATGTCTCTAGCAGTTTCTTCCTTGGTGATGCCAACATTGTCCTTAAATCAGTGAATGGTGTTGTGAATGGAGTCAGCATTGTTGATAACATGTTTTCAGGGTCCGGTTCTGGGGTGGAGATTGTTCAATTGGACCAATCAAAAAACAGTTTCAACCAAATTGATCAAGCTATTGTTGATAGGAACATTGTGAGGGGAATGAATTTGAAGGCCACAGTGGCAAAAATGTCAATTCAAGGGAATGGAACATTATGGAATGTTGATTTTAGTAATGTTCTGCTTTTTCCAAACCTTATCAGAAATGTTCAGTACTCATTAAGCTCTAGTGGTGGAACATTCCCTAATCATGCTTTGAGGAATGTATCTGAGAACAAGGTTGTGATTGAAACAAGTGAAGCAGTGGATGCAAATGTTTTTGTTACTGTGGATCAGAGTATGGTAAATTGA 1617 0.4255 MATHLECFFLKLEPLLTMARTFLVWFLCLGVPCFFVIIDGGVYGDHQNLHPRTISGANHYHKDIRRLQAFKASLTRHASVASTPSSFSSSSASSPLLSEGVNNPRVYHVTSYGADPSGNSDSTEAILAAIADAAKVPSQGQLMQGITDLGGVHVDLEGGSYLISRPLRLPAARLGNLMIHGGTIRASNNFPEDGYLIDLSSTSSSSSSSNNNNNNNNNNENNGANSESSRSSRYNFEYISFKDLLLDSNFRGGGISVINSLRTNIDNCYITHFTTNGILVQSGHETYIRNTFLGQYVTAGGDKNEKNFSGTGISLLGNDNAVTDVVIFSAAIGIMVTGQANTFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTSIVAEDPVQLHVSSSFFLGDANIVLKSVNGVVNGVSIVDNMFSGSGSGVEIVQLDQSKNSFNQIDQAIVDRNIVRGMNLKATVAKMSIQGNGTLWNVDFSNVLLFPNLIRNVQYSLSSSGGTFPNHALRNVSENKVVIETSEAVDANVFVTVDQSMVN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01517 538 MobiDBLite consensus disorder prediction 201 229 - -
Arst4g01517 538 SMART pbh1 412 433 IPR006626 -
Arst4g01517 538 SMART pbh1 317 338 IPR006626 -
Arst4g01517 538 SMART pbh1 174 199 IPR006626 -
Arst4g01517 538 SMART pbh1 260 282 IPR006626 -
Arst4g01517 538 PANTHER POLYGALACTURONASE QRT3 56 536 IPR039279 GO:0004650
Arst4g01517 538 SUPERFAMILY Pectin lyase-like 105 355 IPR011050 -
Arst4g01517 538 FunFam Polygalacturonase QRT3 109 529 - -
Arst4g01517 538 Gene3D - 106 538 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01517 Arst-Chr4 20588888 20592483 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01517 4 20588888 20592483 Arst4g01517 4 20588888 20592483 ECH