Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01516 CACCACCACCACCACCACCACCACCACCACCATCAACATCACGCGTTCACGTTCACTTTTCTTCACTCTTGTTTCTTCTTCTTCTTTCTCTTGTCAGCTCCTCCTCCTGCATGCGCTTCAACGTTTTCTGGTAATGAAACTGGAGATTTAGAAAAACAAGGTGATTTGTTTCCACAGATTCTACGAGATGAGGCAGTGGGGAGACTCTATCAGCTTGGAAAGGTGAGTGATGGTAATGGCTATCTGGAGAGAACATTCTTGAGTCCTGCATCTATGAGAGCAATCAACGTTATCCGCGAGTGGATGGAGGACGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAACGTACACGGCCGAGTTGAAGGTGCGAATCCAAATGCCGAGGCCTTATTGATTGGATCTCACATGGATACTGTTGTGGATGCTGGCATGTTTGATGGATCACTAGGAATAGTATCAGCAATATCTGCACTAAAGGCTTTGAAAGTCAATGGAAAGCTGGAAAAGCTAAAGCGCCCTGTTGAGGTGATTGCATTTTGTGATGAAGAAGGAGTGAGGTTTCAAACTACTTTCTTGGGTAGTGGCGCTATAGCCGGCATTTTACCTGCTACAACATTGGAGATATCTGATAAGAGGGATGCAATGATAAAAGATGTTCTCAAGGAGAATTCTATAGAAATTACAGAGGAAAGTTTGTTACAGCTCAAGTATGATCCAAAATCTGTTTGGGGCTATGTTGAGATTCACATTGAACAGGGGCCTGTGCTAGAACAGAAGGGTTTTCCACTTGGTGTGGTTAAAGGCATAGCTGGCCAGACCAGATTGAAGGTTACTGTTAGAGGATCACAGGGTCATGCCGGGACTGTACCGATGTCCATGCGCCAAGATCCTATGGCTGCTGCTGCTGAATTAATAGTAGTTATGGAAAACCTCTGCAAGAACCCAGAAGAATTCCTTTCTTATGATGATCATTGCAGTGATTCTACGGTGAAATCACTTTCGAGTTCACTTGTTTGTACAGTTGGAGAGATATCAACATGGCCGAGTGCTAGTAATGTCATTCCAGGCCAGGTTACATATACTGTGGACATTCGAGCAATTGATGACCTTGGACGCGAGGCTGTTATCTATGATTTATCAAAAAGAATGTATCAAATATGCGATAAGCGCTCCGTTTCCTGCAATATTGAACATAAGCATGATGCAGGTGCTGTGATTTGTGATTCTGAGCTAAGTTCGCAGCTCAAATCCGCAGCATATTCTGCACTAAAGAGGATGGAGGGTGACATTCAGGATGAAGTTCCAACATTGATGAGTGGAGCAGGCCATGATGCAATGGCTATGTCTCATTTAACAAAGGTTGGGATGCTGTTTGTGCGGTGTCGCGGAGGAATAAGTCACTCTCCTCAAGAGCATGTTCTAGATAATGATGTTTGGGCTGCTGGTTTGGCAACCCTCTCATTTCTGGAGAATCTATGA 1482 0.4447 MACLSRRWVPSPDMLSGEHLSHHHHHHHHHHHHHHHHQHHAFTFTFLHSCFFFFFLLSAPPPACASTFSGNETGDLEKQGDLFPQILRDEAVGRLYQLGKVSDGNGYLERTFLSPASMRAINVIREWMEDAGLRTWVDQMGNVHGRVEGANPNAEALLIGSHMDTVVDAGMFDGSLGIVSAISALKALKVNGKLEKLKRPVEVIAFCDEEGVRFQTTFLGSGAIAGILPATTLEISDKRDAMIKDVLKENSIEITEESLLQLKYDPKSVWGYVEIHIEQGPVLEQKGFPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMAAAAELIVVMENLCKNPEEFLSYDDHCSDSTVKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSKRMYQICDKRSVSCNIEHKHDAGAVICDSELSSQLKSAAYSALKRMEGDIQDEVPTLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPQEHVLDNDVWAAGLATLSFLENL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01516 519 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 157 166 IPR001261 -
Arst4g01516 519 Gene3D - 298 430 - -
Arst4g01516 519 CDD M20_bAS 94 517 - -
Arst4g01516 519 SUPERFAMILY Bacterial exopeptidase dimerisation domain 298 431 IPR036264 -
Arst4g01516 519 Pfam Peptidase family M20/M25/M40 158 508 IPR002933 GO:0016787
Arst4g01516 519 FunFam Allantoate deiminase 298 430 - -
Arst4g01516 519 PANTHER ALLANTOATE DEIMINASE-RELATED 72 517 IPR010158 GO:0016813
Arst4g01516 519 NCBIfam hydantoinase/carbamoylase family amidase 96 343 IPR010158 GO:0016813
Arst4g01516 519 Gene3D Zn peptidases 104 509 - -
Arst4g01516 519 SUPERFAMILY Zn-dependent exopeptidases 83 519 - -
Arst4g01516 519 Pfam Peptidase dimerisation domain 298 408 IPR011650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01516 Arst-Chr4 20489748 20494002 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01516 4 20489748 20494002 Arst4g01516 4 20489748 20494002 ECH