Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g01504 ATGGCTTCTCCCCTTCTTCACCAGCCAACGCAGTTCTTTTTCTCCAACACCCAGTTAAAAGGACCTAGCCATGGATTCTTGTGGCGACCCCCTTGTTCTTCATTTGGCGCCTCTCATTCTGAAAACAAAGCTCGGCCCATTAGAGCTTCGGTTGATGCACCCACATTTCCATTGTTTCAGACTCCAAAACAGCATGACTCAGCCTCTGAGTTGGAGCCTGCAGATCCTGATTTCTACAAGATCGGTTATGTCCGAAGCATGAGAGCTTACGGAGTTGAGTTTAAGGAAGGGCCGGATGGATTTGGTGTGTATGCTTCCAAAGATGTGGAACCTCTCCGGCGAGCAAGGGTTATAATGGAAATTCCTCTTGAATTGATGTTAACCATAAGCAAGAAACTCCCATGGATGTTTTTCCCAGATATAATTCCTATAGGTCATCCAATATTTGATATTATCAACTCTACAGATCCAGAGACAGATTGGGACTTAAGGTTAGCTTGCCTCCTCCTATATGCATTTGATTGCGAAGACAACTTTTGGCAGTTGTATGGTGACTTCTTACCAAGTGCAGATGAGTGTACCAGCTTACTTCTAGCTTCAGAGGATGAACTTTCAGAGCTTCAAGATCCCGATCTTGCTTCTACTATGAGAAACCAGCAATATCGAGCCCAAGAATTCTGGGAAATGAACTGGCACAATTCTGCACCCCTTAAAATAAAGCGTCTTGCTCGTGATCCTCGAAGGTTCTTGTGGGCAGTGGGTATTGCACAGTCACGATGTATTAACATGCAGACGAGAATTGGTGCATTAACTCAAGATGCAAATATGCTTATTCCTTATGCTGATATGCTGAACCATTCCTTTGAGCCGAATTGCTTTCTGCATTGGCGTTTTAAGGACAGGATGCTTGAAGTTCTTATAAATGCTGGCGAGCAAATTAAAAGGGGAGATGAGATGACAATTAATTACATGAGCGGACAGAAGAATGAGATCCTAATGCAAAGATATGGATTTTCATCACCCGTGAATCCTTGGGATGTGATCAAATTCTCAGGCAATGCAAAGATTCATCTGGATTCCTTTTTGTCCGTCTTCAATATATCTGGCCTTCCCGAAGAATATTACCATAACAAATGTCTAGCAATCGATGGCGATACTTTTGTTGATGGAGCTGTTGTAGCTGCAGCACGAACATTGCCAACTTGGTCGGACAAGGATGTGCCTCCAATCCCTAGTGCAGAAAGAATGGCAGTAAAGGAGTTGCAACAAGAATGTCGACAGATGCTTGCTCAATACGCTACAACCTCTAAGCAAGACGAGAAATTGCTTGATTCCTTGCCGAACGCTCCGAGGACGCTCGAAGCTGCAATTAAGTATAGATTGCACCGGAAATTGTTCATTGAGAAGGTTATCCAAGCATTGGAGATCTATCAAGATAAGATACTTTTCTGA 1452 0.4339 MASPLLHQPTQFFFSNTQLKGPSHGFLWRPPCSSFGASHSENKARPIRASVDAPTFPLFQTPKQHDSASELEPADPDFYKIGYVRSMRAYGVEFKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTISKKLPWMFFPDIIPIGHPIFDIINSTDPETDWDLRLACLLLYAFDCEDNFWQLYGDFLPSADECTSLLLASEDELSELQDPDLASTMRNQQYRAQEFWEMNWHNSAPLKIKRLARDPRRFLWAVGIAQSRCINMQTRIGALTQDANMLIPYADMLNHSFEPNCFLHWRFKDRMLEVLINAGEQIKRGDEMTINYMSGQKNEILMQRYGFSSPVNPWDVIKFSGNAKIHLDSFLSVFNISGLPEEYYHNKCLAIDGDTFVDGAVVAAARTLPTWSDKDVPPIPSAERMAVKELQQECRQMLAQYATTSKQDEKLLDSLPNAPRTLEAAIKYRLHRKLFIEKVIQALEIYQDKILF 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g01504 483 Gene3D - 360 481 IPR036464 -
Arst4g01504 483 Gene3D set domain protein methyltransferase, domain 1 84 338 - -
Arst4g01504 483 Pfam Rubisco LSMT substrate-binding 413 464 IPR015353 -
Arst4g01504 483 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 335 475 IPR036464 -
Arst4g01504 483 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 50 453 - -
Arst4g01504 483 Pfam SET domain 100 323 IPR001214 GO:0005515
Arst4g01504 483 CDD SET_LSMT 91 338 - -
Arst4g01504 483 SUPERFAMILY SET domain 99 339 IPR046341 -
Arst4g01504 483 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 84 338 - -
Arst4g01504 483 FunFam Plastid transcriptionally active 14 360 480 - -
Arst4g01504 483 Coils Coil 418 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g01504 Arst-Chr4 20254090 20259673 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst4g01504 SET 7.4e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g01504 4 20254090 20259673 Arst4g01504 4 20254090 20259673 ECH