Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05777 ATGGGCAAATCGGCTCTTTGGCTCACCACATTCACCCTCGTATTGACGGGCTTCCTGACGGCCCGGGCTCAGCCAGAGGCAAACTTCAAGTGCAGCAGCAGCACGAACGCCACGTGTCGAGCTCTAATCGACTACTTTAGCCAGAATGCGACCACGCTCCGAGACATCCAGAAGCTGTTCAACGTGAAGCACCTCCCGGACCTGTTGGGCGCAAACGCCAACACGATCCCGGAAAACGCGTCAGGCAGTTACAGCGTGGCGCCCAAGCAGGTAGTTAGGATTCCGTTTCCGTGCAAGTGCAGTAACGGAACGGGGCTGTCGAACCACGTGCCGTTGTACAAAATCAAGCCTGGTGATGGCTTGGACTACATAGCAAGGACAGTGTTCGCGGGCGTGGTGACGTACCAGCAGATCCAGAAGGCTAATAATATCTCTGACGCCAATAAGATCATCGCTGGGGATTCCATTTGGATACCGTTGCCTTGTAGCTGTGATAGTGTTGGAGGGAGCAGTGTGGTGCACTATGCTTACATAGTTCCAATTGGAAGCTCCGTGGAGGGGATTGCACAGGAGTTTGGTACCACTGAACAGATCATTCTTAGTCTCAACGGTATTGATGACCCTAAGAAGCTTCAGGCACAGCAGGTTATCGATGTCCCTCTCAAAGCTTGTTCCACAAGTGTGAAAAACAATTCCATGGACTACCCTCTGCTGGTTTCAAACTCCACTTATGTCTACACTGCCAACGAATGCGTGAAATGCAAATGCGACTCCAGCAACAACTATGTATTGCAATGCGAGCCATCGCAGCTTAAACCAACAGGGGGAAAGTGGTCGGTATGCCCCTCCATGAAATGCACAGGGAACCTGACAATTGGCAACTTGACATCTGCTTCAGATGATCCATGCAACCGCACCTTCTGTGCCTATGCGGGTTATAGCTTCAAAAGAATCAATACCATTCTTGCTAATGAGTCCACTTGTCCTGCACCGGCACCTGCACCCAGTGGCGGTTCAGTAGGACCAGGTGGTTCAGGATCAGGAGCGTCAAGGACTACCTTCGGTCTTATCATTGTTCTCCACTTCATCCTTCTTGCTCTCTGTCTTTTGTAG 1113 0.5121 MGKSALWLTTFTLVLTGFLTARAQPEANFKCSSSTNATCRALIDYFSQNATTLRDIQKLFNVKHLPDLLGANANTIPENASGSYSVAPKQVVRIPFPCKCSNGTGLSNHVPLYKIKPGDGLDYIARTVFAGVVTYQQIQKANNISDANKIIAGDSIWIPLPCSCDSVGGSSVVHYAYIVPIGSSVEGIAQEFGTTEQIILSLNGIDDPKKLQAQQVIDVPLKACSTSVKNNSMDYPLLVSNSTYVYTANECVKCKCDSSNNYVLQCEPSQLKPTGGKWSVCPSMKCTGNLTIGNLTSASDDPCNRTFCAYAGYSFKRINTILANESTCPAPAPAPSGGSVGPGGSGSGASRTTFGLIIVLHFILLALCLL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05777 370 CDD LysM 113 158 IPR018392 -
Arst3g05777 370 ProSiteProfiles LysM domain profile. 175 219 IPR018392 -
Arst3g05777 370 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Arst3g05777 370 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 6 331 - -
Arst3g05777 370 Gene3D LysM domain 112 167 IPR036779 -
Arst3g05777 370 Pfam LysM domain 177 220 IPR018392 -
Arst3g05777 370 Pfam LysM domain 113 159 IPR018392 -
Arst3g05777 370 SMART LysM_2 112 159 IPR018392 -
Arst3g05777 370 SMART LysM_2 176 220 IPR018392 -
Arst3g05777 370 Gene3D LysM domain 170 233 IPR036779 -
Arst3g05777 370 CDD LysM 177 219 IPR018392 -
Arst3g05777 370 SUPERFAMILY LysM domain 112 160 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05777 Arst-Chr3 131413744 131416514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05777 1 360 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 45.580 8.99e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g05777 - - gmx:100804190 414.846