Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05773 ATGAACATGATGCTGGCTTCGTTCCCTGTATACCCAAAACCCTTTGCAAGCGTTAGAGCAGAATTCCACACACAGCAATCTTCTTTTCTCAAGTTCGCACCTCATTCCTATCCTCTTGCAAGCAAAATCCTTGTTAAGAATTTGCCATATACTACTGGTGAGACTACTTTGCAAAAGGAATTTTCGAATTTTGGCAAGATAGCTGAAGTTAAGGTTGCTAAAGATGTAAAAACGAAAAGATCAAAAGGATATGCTTTTATTCAATACATGTGTCAAGATGACGCCATGCTTGCGCTAGAAACAATGGATCAGAAGGATTTTTATGGTAGGACGATTCATGTAGAAATTGCAAAGCTTGGCTGGGATGATTATGGTGCACGGCCAAGGACCTCAGGGCCCCAAAAGAAATGGAATTTGCCAGAGCCAGAGCAAGAGGAGGTGGTAGATTGCTGGTACTGA 459 0.4183 MNMMLASFPVYPKPFASVRAEFHTQQSSFLKFAPHSYPLASKILVKNLPYTTGETTLQKEFSNFGKIAEVKVAKDVKTKRSKGYAFIQYMCQDDAMLALETMDQKDFYGRTIHVEIAKLGWDDYGARPRTSGPQKKWNLPEPEQEEVVDCWY 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05773 152 SUPERFAMILY RNA-binding domain, RBD 41 127 IPR035979 GO:0003676
Arst3g05773 152 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 40 139 - -
Arst3g05773 152 Gene3D - 21 144 IPR012677 -
Arst3g05773 152 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 41 119 IPR000504 GO:0003723
Arst3g05773 152 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43 113 IPR000504 GO:0003723
Arst3g05773 152 SMART rrm1_1 42 115 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05773 Arst-Chr3 131382066 131384074 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05773 3 131382066 131384074 Arst3g05773 3 131382066 131384074 ECH