Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05454 ATGTTTGTTATGGGCAGATCCAAAATTTCGTACATGGTACCTGATTCCAACAACATAAACCAAGTTCTTGTACAGAATCCTCCTAGTACTACCACCCACCAATGTTCATTCCCAACTAAGCTTCTACTGTTACTGCGCCGCCTCATCCATTCAAAGGAAGCTGATGGGGGTTCACAAAGTAAGGAAGAAGAGAGAGTGTGCTCATGGTTATACACTTTGGCTCACTCTCAGAAATACATTGCCTTCGAGTATGTTGCTTCCACCGAAAGAGGTCTAAGTTTCACTGAAGCAGAGAGGAGGCTAAAGGAAAATGGGCCAAATGTTCCACTTGAGTATTCTTTTCCAAGGTGGTGGCATCTTTTGTGGAATTCTCTTTTCCATCCTTTTAACATGATCCTCATTGTTTTATCTGCAATGTCATTCATTGCTTGTGACGATGCAAATGGATGCATCATGCTTATACTGGTTTTCATTAGTGTTGCCCTTCGTTTCTGTCAGGAATACAGCAGCTCAAAAGCAGCCATGAAACTTTCTGAATTGGTAAGGTGCCCAGTAAAAGTGCAAAGATGCGCTGGTAGAGTTGTGCAGAGAGAGTTAATTGTTCAAGTTGATCACAGGGATATAGTTCCCGGCGACATTGTCATTTTTGAACCTGGTGATCTCTTTCCTGGTGATGTTAGGTTGTTATCTTCAAAGCATCTTGTTGTGAGCCAGGCCTCACTAACTGGGGAATCTTGGACAACTGAGAAAACTGCTGATATCAGAGAAGATCAAAGCACTCCTTTATTAGATTTAAAGAACATCTGCTTCATGGGCACGAGCGTGGTTTCAGGTACTGGAACAGGATTGGTTGTATCGACAGGATCCAATACTTATATGAGCACCATGTTTTCAAAAGTTGGGAAGAGGAAGCCACCAGATGACTTTGAAAAGGGTCTCAAGTGGATATTTTACTTGCTTATTTCAGTTATGCTAGTGCTAGTTACAATTATGTTCTTGACAGATTACCTTACATCACTTAATTTGAGCAACAGCATTCTTTTTGCAATCTCAGTTGCATCTGCCCTCAATCCTCAGATGCTTCCCCTCATTGTGAATACATGTCTAGCCAAAGGAGCACTTGCTATGGCTAAAGACAAGTGTATAGTTAAAAGTTTGACTGCGATTCGCGAGATGGGATCCATGGATATTCTATGTATTGACAAGACAGGCACACTAACAATGAATCGTGCAATTATGGTTAATCATGTTGACAGCAAAGGGATGCCCCAAGAACAAGTTCTACGCTTTGCATTTCTCAATTCTTACTTCAAGATTGAGCAGAAGTATCCATTGGATGATGCAATTCTTGCATATGTATATACAAATGGATTTAAGTTTCAGCCATCCAAGTGGAGAAAGCTAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTAATCTTAGAAACAAATGAGAGACAGCCACAGTTCTCTGGCAGGTTCATGGTAACAAAAGGAGCATTGTTAGAAGTCATGAGAGTTTGTTCTTACATTGCAAATTCTGACAAAAAAGAAGGAATCTCGATCTTCTCTTCAGATGACTATAATAGAGTTTTAAATCTTTCAGAAGAACTAAGCAATGAGGGATTAAGGGTTATAGCAGTAGCTATAAAGAAACTTGGAGAGGAAGCAAGTAATGGAATAAAGACAAGTGAGGAGGGAGACATGATATTCCTTGGCCTAATAACATTTTTCGACCCACCAAAGGCATCGGCGAAAGAAGCACTGCGGCGTTTGGCAGAAAAAGGAGTTGAAGCAAAGGTTTTAACAGGTGATTCACTGTCATTGGCAACAAGAGTATGCACTGAAGTTGGCATAAGAACCAGTGATGTGATAACAGGGCCAGAGCTAGAGCAACTTGACCAAGAAAGTTTCCATGAGACGGTTCAACGCGCCACGGTGCTAGCACGCCTGACGCCAACTCAGAAACTGAGAGTGGTACAGTCCTTGCAGACAGTTGGAAAGCATGTGGTTGGATTCTTGGGAGATGGTGTGAATGACTCTCTTGCCCTTGATGCTGCGAATGTTAGCATTTCAGTGGACTCAGGTGTAGCCATAGCCAAAGACATGGCAGATATCATCTTACTTGAGAAGGATCTGAATGTGCTGGTTGCAGGAGTAGAGCACGGTAGACTCACCTTTGGCAACACAATGAAGTATGTGAAAATGTCAGTTATTGCAAACCTGGGAGGCGTGATTTCACTGCTCATAGCAATCTTGTTCCTCAAGTATGAGCCCTTAACCTCTAAACAGCTCCTCACACAGAACTTGCTCTACAGCGTGGGACAAATCGCCATCCCCTGGGACAAAATGGACGGAGAGTATGTGAAGAGTCCTCAGAAATGGTCAGAGAAAGGGTTGCCAATGTTCATATTGTGGAATGGGCCAGTTTGCACTCTCTGTGACGTGGCAGCACTCTTGTTCCTTTGGTTCTATTACAATATCGGAGCTGATTTGGATGAGAAGTTCTTCCATTCAGCATGGTTCATTGAGGGCCTCCTCATGCAGACTCTCATCATTCACTTGATCAGAACTGACAAAATTCCTTTCATACAGGACATTGCTTCTTCGCCTGTCATGTGCTCCACGCTTGTCATATCTGCAATTGGAATTGCACTTCCATTCACACCTATTGGGAGAATCATGGAATTCACGCTTCTACCCTTCTCCTATTTCGGATTTTTGCTCATTCTTTTTCTTGGATACTTTGTACTTGGCCAGCTCGTTAAGAGACTTTACATATTGCTTTATAAGAGATGGCTTTGA 2814 0.4222 MFVMGRSKISYMVPDSNNINQVLVQNPPSTTTHQCSFPTKLLLLLRRLIHSKEADGGSQSKEEERVCSWLYTLAHSQKYIAFEYVASTERGLSFTEAERRLKENGPNVPLEYSFPRWWHLLWNSLFHPFNMILIVLSAMSFIACDDANGCIMLILVFISVALRFCQEYSSSKAAMKLSELVRCPVKVQRCAGRVVQRELIVQVDHRDIVPGDIVIFEPGDLFPGDVRLLSSKHLVVSQASLTGESWTTEKTADIREDQSTPLLDLKNICFMGTSVVSGTGTGLVVSTGSNTYMSTMFSKVGKRKPPDDFEKGLKWIFYLLISVMLVLVTIMFLTDYLTSLNLSNSILFAISVASALNPQMLPLIVNTCLAKGALAMAKDKCIVKSLTAIREMGSMDILCIDKTGTLTMNRAIMVNHVDSKGMPQEQVLRFAFLNSYFKIEQKYPLDDAILAYVYTNGFKFQPSKWRKLDEIPFDFIRRRVSVILETNERQPQFSGRFMVTKGALLEVMRVCSYIANSDKKEGISIFSSDDYNRVLNLSEELSNEGLRVIAVAIKKLGEEASNGIKTSEEGDMIFLGLITFFDPPKASAKEALRRLAEKGVEAKVLTGDSLSLATRVCTEVGIRTSDVITGPELEQLDQESFHETVQRATVLARLTPTQKLRVVQSLQTVGKHVVGFLGDGVNDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYVKMSVIANLGGVISLLIAILFLKYEPLTSKQLLTQNLLYSVGQIAIPWDKMDGEYVKSPQKWSEKGLPMFILWNGPVCTLCDVAALLFLWFYYNIGADLDEKFFHSAWFIEGLLMQTLIIHLIRTDKIPFIQDIASSPVMCSTLVISAIGIALPFTPIGRIMEFTLLPFSYFGFLLILFLGYFVLGQLVKRLYILLYKRWL 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05454 937 ProSitePatterns E1-E2 ATPases phosphorylation site. 401 407 IPR018303 -
Arst3g05454 937 Pfam haloacid dehalogenase-like hydrolase 395 691 - -
Arst3g05454 937 SFLD Haloacid Dehalogenase 381 727 - -
Arst3g05454 937 SFLD Haloacid Dehalogenase 381 727 - -
Arst3g05454 937 SUPERFAMILY Calcium ATPase, transduction domain A 193 298 IPR008250 -
Arst3g05454 937 Gene3D - 149 887 - -
Arst3g05454 937 Gene3D - 183 287 - -
Arst3g05454 937 SUPERFAMILY HAD-like 570 725 IPR036412 -
Arst3g05454 937 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 405 587 IPR023299 GO:0000166
Arst3g05454 937 Pfam E1-E2 ATPase 193 378 - -
Arst3g05454 937 SFLD p-type atpase 381 727 IPR044492 -
Arst3g05454 937 SFLD p-type atpase 381 727 IPR044492 -
Arst3g05454 937 SMART Cation_ATPase_N_a_2 74 145 IPR004014 -
Arst3g05454 937 Gene3D - 411 581 IPR023299 GO:0000166
Arst3g05454 937 NCBIfam magnesium-translocating P-type ATPase 67 936 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05454 937 PRINTS Magnesium-transporting ATPase signature 785 798 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05454 937 PRINTS Magnesium-transporting ATPase signature 840 861 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05454 937 PRINTS Magnesium-transporting ATPase signature 312 328 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05454 937 PRINTS Magnesium-transporting ATPase signature 433 446 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05454 937 PRINTS Magnesium-transporting ATPase signature 753 764 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05454 937 PRINTS Magnesium-transporting ATPase signature 805 821 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05454 937 PRINTS Magnesium-transporting ATPase signature 735 750 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05454 937 PRINTS Magnesium-transporting ATPase signature 890 911 IPR006415 GO:0015444|GO:0015693|GO:0016020
Arst3g05454 937 SUPERFAMILY Calcium ATPase, transmembrane domain M 87 934 IPR023298 -
Arst3g05454 937 PANTHER CATION TRANSPORTING ATPASE 80 927 - -
Arst3g05454 937 Gene3D - 396 714 IPR023214 -
Arst3g05454 937 NCBIfam HAD-IC family P-type ATPase 644 757 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst3g05454 937 NCBIfam HAD-IC family P-type ATPase 152 446 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst3g05454 937 Pfam Cation transporter/ATPase, N-terminus 85 140 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05454 Arst-Chr3 129190429 129194039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05454 90 833 Primary Pumps ATPases(2) AT1G10130 26.588 1.51e-60 222