Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05354 ATGGTGGCACTGGCCAATGCCATTGTGGCCACGGTGCTGGTGCTGGTGCTTGTGGCGGTGTTTCCACTGGGAAAGGCAGATCTGGCATCGGAGCGGGCGGCATTGCTGGCTCTACGGTCCTCCGTCGGCGGCAGAACCCTCTTCTGGAACGCGACCAACCAGAGCCCCTGCAACTGGGCTGGCGTGCAATGCGAGCAGGGTCAGGTGGTGGAGCTCCACCTGCCCGCCGTGGCACTCTCCGGGCGCATTCCGGCGGGAATATTCGGGAACCTGACACACCTTCGCACCCTGAGCCTGCGGTTCAACGCGCTGACGGGACCCCTCCCCGCAGATCTGGCATCGTGCATCAACCTCCGGAACCTGTACCTGCAGCGCAATCTGCTTTCCGGCAAAATCCCAGAGTTGCTGTTCCGGCTGCCGGACCTGGTCCGCCTGAACCTTGGCTTCAACAATTTCTCGGGTGGGGTCCCCGCAGAGTTCAACAAGTTGAGCAGACTTAGAACTCTTTACCTCCAAAACAATCAGCTCTCCGGTCCCATCTCGCAGCTCAGCCTGCCGGACCTCGAGCAGTTCAACGTCTCCAACAACTTCCTCAATGGCTCTGTCCCCGACAAGCTCCAGAAATTCCCCCAAGATTCCTTTCTTGGCAATTCCCTCTGCGGCCGCCCGCTCAAGCTCTGCCCCGGCGACGATGCATCTGCATCTTCTCCTTCCGGCGACATTCCCAATAACAAGACCAAGAAGAAGAACAAGTTATCTGGCGGTGCCATTGCTGGAATTGTCATCGGATCCGTCGTGTGTCTTCTGCTGCTCGTATTCGCACTGATTCTTTTGTGTAGGAAGAAGAGTTCCAAGAAGACCAGTGCCGTTGAAGTTGCAACCGTCAAGCATCCGGAGCCCGAACTTCCAGGCGACAAACCAGTGGACGAGTTGGAGAACGGGCCGGGGCCCCACAGTAATGGCGCTCACGAGAATGGGTATACGGTGGCTGCAGCAGCTGCAGCGGCTATGGCGGCAGGGAATGGAAACAAGGCCGAGGCCAACGGCGGCGGTGGTAGTGGAGCCAAGAAGTTGGTGTTTTTTGGTAATTCTGCAACAGCGGGGGCGGCGAGGCCATTTGATCTGGAGGATTTGCTTCGGGCTTCGGCGGAGGTATTGGGGAAAGGTACGTTTGGTACGGCGTACAAGGCGGTTTTGGAGGCAGGGCCGGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACGATTTCCGAGAAGGAGTTCAAGGAGAAGATCGAGTCTGTGGGAGCAATGGATCATGAGAACTTGGTTCCTCTGAGGGCTTATTATTTCAGCAGAGATGAGAAGCTTCTTGTCTATGATTACATGCCCATCGGAAGCTTATCTGCTCTTTTGCATGGAAACAAAGGAGCGGGGAGGACACCTTTAAACTGGGAAATCAGGTCAGGTATTGCACTTGGAGCTGCACGCGGGATTGAATACCTTCACTCACAGGGAACCAATGTTTCTCATGGAAACATTAAGTCCTCTAATATCCTCTTAACCAAGTCCTACGATGCTAGAGTATCTGACTTCGGCCTCGCCCACCTTGTTGGCCCCTCCTCCACCCCTAACCGAGTGGCCGGCTATCGCGCCCCTGAGGTCACTGATCCTCGCAAAGTATCCCAGAAGGCAGATGTGTACAGCTTTGGCGTGCTGCTCTTGGAGCTACTGACCGGGAAAGCACCCACCCATGCTATCCTAAACGAGGAAGGAGTGGACCTCCCTAGATGGGTCCAATCCGTCGTCCGAGAAGAGTGGACTTCGGAGGTATTTGATCTTGAGCTGCTGAGGTACCAGAATGTTGAAGAGGAGATGGTTCAGCTGTTGCAGCTGGCAGTTGATTGCGCAGCACCCTACCCGGATAAGCGCCCTTCCATGTATCAAGTGGTACAGAGCATTGAAGAATTGCGTCGCTCCAGCTTGAAAGAGGATCAGGACCAAATCCAAACCCAACATGATCTTGTAGAGTTATAG 2013 0.5539 MVALANAIVATVLVLVLVAVFPLGKADLASERAALLALRSSVGGRTLFWNATNQSPCNWAGVQCEQGQVVELHLPAVALSGRIPAGIFGNLTHLRTLSLRFNALTGPLPADLASCINLRNLYLQRNLLSGKIPELLFRLPDLVRLNLGFNNFSGGVPAEFNKLSRLRTLYLQNNQLSGPISQLSLPDLEQFNVSNNFLNGSVPDKLQKFPQDSFLGNSLCGRPLKLCPGDDASASSPSGDIPNNKTKKKNKLSGGAIAGIVIGSVVCLLLLVFALILLCRKKSSKKTSAVEVATVKHPEPELPGDKPVDELENGPGPHSNGAHENGYTVAAAAAAAMAAGNGNKAEANGGGGSGAKKLVFFGNSATAGAARPFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPVVAVKRLKDVTISEKEFKEKIESVGAMDHENLVPLRAYYFSRDEKLLVYDYMPIGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGTNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHAILNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDKRPSMYQVVQSIEELRRSSLKEDQDQIQTQHDLVEL 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05354 670 Gene3D Ribonuclease Inhibitor 30 138 IPR032675 -
Arst3g05354 670 MobiDBLite consensus disorder prediction 292 324 - -
Arst3g05354 670 Pfam Leucine rich repeat N-terminal domain 29 64 IPR013210 -
Arst3g05354 670 Gene3D Transferase(Phosphotransferase) domain 1 455 669 - -
Arst3g05354 670 FunFam Probable inactive receptor kinase RLK902 28 183 - -
Arst3g05354 670 FunFam pollen receptor-like kinase 1 344 454 - -
Arst3g05354 670 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
Arst3g05354 670 Gene3D Ribonuclease Inhibitor 141 227 IPR032675 -
Arst3g05354 670 SUPERFAMILY L domain-like 47 209 - -
Arst3g05354 670 SUPERFAMILY Protein kinase-like (PK-like) 384 647 IPR011009 -
Arst3g05354 670 MobiDBLite consensus disorder prediction 230 251 - -
Arst3g05354 670 FunFam Probable inactive receptor kinase At1g48480 455 658 - -
Arst3g05354 670 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Arst3g05354 670 PANTHER OS05G0588300 PROTEIN 10 655 - -
Arst3g05354 670 ProSiteProfiles Protein kinase domain profile. 380 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05354 670 Pfam Protein kinase domain 383 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst3g05354 670 Gene3D Phosphorylase Kinase; domain 1 363 454 - -
Arst3g05354 670 MobiDBLite consensus disorder prediction 298 312 - -
Arst3g05354 670 CDD STKc_IRAK 386 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05354 Arst-Chr3 128493407 128496267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g05354 27 650 Receptor kinase-like Gene Family AT1G48480 64.780 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Arst3g05354 Pkinase 4.9e-39 CL0016