Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05310 ATGTTACAGAGCTACTTCAGATTCAGACTCACAACCACAACCGCCATGTCCCTCAGGCCTCTCAGGCCTCTCAGGCCCTCTCTTCCTTCCGCCACCTCCCACTTAATTGGCCTCAGGGCCTTTCACCTCCGCCCCACCATAGCCTCTCATCTTCGTCTCCACCCATGCTCCGCGGCGCCAACCGGGGCGGTTGAGCTGGAATGGAACGACAGGCAGCGCTTCAAGCAGAGGACCGTTGCTCTGCCGTTTTGGCGTCAACGCAACTCCAATTACGGCCGTTTTGCCTACCAAGACTTCTCCAGTGATGATGAATCCGACGTGGAACTTGCCTCTCCACGCTCTCCGGCTCAGCAACAGATGGGAGAGTCGACTCTTGAAAACATTGATGAGTGGAGATGGAAGCTGACCATGCTTCTCCGCAGTAACGAGGAGCAAGAAGTTGTGTCCAGGGAGAAAAAGGACCGGCGTGATTATGAGCAACTTTCAGCTTTAGCTACCAGAATGGATCTATACAGCCGACAATATGCAAGAGTTGTTGTCTTTAGTAAAGCACCTCTGCCAAATTACCGCCCTGATTTGGATGATAAACGTCCACAAAGAGAGGTAATCTTACCCTTTGGTATTCATAGAGAAGTAGATACTCATCTCCGTGCCCATCTTTCACAAAAGCCTACCAAAAGGCTAGGTTCTTTTGATGATTCTTTGCATAGATCAAGTGATGCTGGAAGTATTCACACCAATGACGGGATTTATGAGAAGCCAGTGCCTAGGATCCATAATTCTGTTGTCAAGGAGAAAATCCTTCAGCGAAGAAGTTTGGAACTGCGTAATAAGCAAGAAGATTGGCAGGGGTCTCCTGAAGGGCAAAGGATGCTCGAATTTCGTAGAAGTCTTCCTGCATTCAAAGAGAAAGATGCATTTTTGAAAGTCATTTCAAATAATCAGGTCATTGTTGTCTCAGGTGAAACTGGTTGTGGTAAGACCACACAACTTCCCCAGTACATACTAGAATCTGAGATTGAAGCTGGATGTGGTGCTGGATGTAACATAATTTGTACTCAGCCTAGAAGAATATCTGCTATGTCTGTTTCTGAAAGAGTTGCAGCAGAACGTGGGGAGAAATTGGGAGAATCTGTTGGCTACAAAGTTCGGTTGGAGGGTATGAAAGGAAGGGATACTCGTCTTCTTTTTTGTACCACAGGTGTATTATTGAGGAGACTACTAGTGGATAGGACTTTAAATGGTGTAACTCATGTTGTTGTTGATGAAATTCATGAACGTGGAATGAATGAAGATTTTCTTTTGATTGTCCTGAAGGAGCTTCTTCCTCGCCGTCCTGATTTGAGATTAATTTTGATGAGTGCAACCTTAAATGCTGAGCTTTTCTCTTCCTACTTTGATGGTGCTCCAACTATGCACATTCCTGGTTTTACATATCCAGTCCGAGCACGTTTTCTGGAGGATATTCTGGAAATGACTGGATATCGGTTGAATCCTTATAATCAAATTGATGACTATGGTCAAGAAAAAACATGGAAAATGCAGAAACAGGCTCTAGCTTTCCGGAAAAGAAAGAGCCAAATTGCTTCTGCTGTTGAGGATGCGCTAGAAGTTGCAGACTTCCATGGATATAGTCTACGCACTCGGGAGTCATTGTCCTGCTGGTGCCCTGACTCACTTGGTTTTAACCTTATTGAACATGTGCTTTCTCACATTGTCAAGAATGAAAGGCCAGGTGCTGTTTTGGTTTTTATGACTGGGTGGGATGACATAAACTCCTTGAAGGATAAGCTCCAAACTCATCCTTTGTTAGGAGATCCCAGCCGTGTCTTGCTTCTAGCATGTCATGGATCCATGGCCAGCACTGAGCAGAGGTTGATATTTGAAAACCCTGAAGGTGGGGTGAGGAAAATTGTTCTGGCAACTAATATGGCTGAGACTAGTATTACCATCAATGATGTTGTCTTTGTGGTTGATTGTGGTAAAGCTAAAGAGACATCATATGATGCACTAAACAACACTCCTTGTTTACTTCCATCTTGGATATCAAAAGCTGCTGCCCGGCAGAGAAGAGGAAGGGCTGGTCGTGTTCAACCTGGTGAATGCTACCATCTATATCCCAGATGTGTTTATGATGCTTTTGCTGATTATCAATTGCCCGAACTTTTGAGAACACCTTTGCAGTCCTTATGTTTGCAAATCAAAAGTTTACAACTTGGAAGCATATCTGAATTCTTAGCTAGAGCTCTCCAGCCACCAGAGGCGCTATCGGTTCAAAATGCTGTTGAGTATCTGAAGATAATTGGGGCCTTGGATGACAATGAAAATTTGACAGTTCTAGGGCGCAAGTTGTCAATGCTTCCTGTGGAGCCCAAACTCGGCAAAATGCTCATTCTGGGCGCTATCTTCAACTGTTTGGATCCCATAATGACTGTTGTTGCTGGTCTTAGTGTAAGGGATCCTTTTGTGATGCCGGCTGACAAGAAGGATCTTGCAGAGTCTGCTAAGGCCCAGTTTTCTGCTCGTGACTATAGTGATCATCTTGCACTTGTCCGAGCTTATGAGGGTTGGAAAGAGGCTGAAGCTCAGCAAGCTGGCTACGAGTACTGTTGGCGAAATTTTCTTTCTTCTCAAACACTTAGGGCCATTGACTCTCTTCGAAAGCAATTTTTTTACTTGCTTAAAGATATTGGGTTGGTTGATCACAATTCTGAGACCTACAGTAGATGGAGTCAGGAGGAGCATCTTGTCCGAGCTGTCATCTGTGCGGGTTTGTTTCCTGGAGTATCATCTGTTGTGGATGGTCACCTAAAAATGTTGGGAGGTTATTTGGAATTTTTCATGAAACCTGAATTAGCTAACACTTACTTGCGGTTGAAGGGGGAGCTGGAGGAACTGATACAGAAAAAACTTCTGGATCCCATGTTCGATACACAATCGCATGACGAGCTTCTTTCAGCTGTTAGATTGGTGATATCTGAGGACCACTGTGATGGCAGATTCGTATTTGGTCGTCGGGCCACACCTGCACCCAAAGTAAAAGAGGCAACAAACTCCAAAAGTAGTGCTGGAGTAGAGGCTGAGAATTTTAAAAACCAGCTTCAGTCATTACTTAACAGAGCTGGACATGAAGTACCAACTTACAAAACAAGGCAACTGAAGAACAACCAATTCCGTTCCACTGTCATTTTTAATGGCTTGGATTTTGTTGGCCAGCCTTGCAGCAACAAGAAACAAGCAGAAAAATCTGCTGCTGCCGAGGCTCTTCTATGGCTGAAGGGTGATATGCATTCTTCACGTGATGTTGCCAGCCATATGTCTGTGCTTTTGAAAAAGAGCAACAAGAAAGATAAGAAAACTTCATCAAAACGTGCTAAATGGAGCTGA 3387 0.4452 MLQSYFRFRLTTTTAMSLRPLRPLRPSLPSATSHLIGLRAFHLRPTIASHLRLHPCSAAPTGAVELEWNDRQRFKQRTVALPFWRQRNSNYGRFAYQDFSSDDESDVELASPRSPAQQQMGESTLENIDEWRWKLTMLLRSNEEQEVVSREKKDRRDYEQLSALATRMDLYSRQYARVVVFSKAPLPNYRPDLDDKRPQREVILPFGIHREVDTHLRAHLSQKPTKRLGSFDDSLHRSSDAGSIHTNDGIYEKPVPRIHNSVVKEKILQRRSLELRNKQEDWQGSPEGQRMLEFRRSLPAFKEKDAFLKVISNNQVIVVSGETGCGKTTQLPQYILESEIEAGCGAGCNIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLLVDRTLNGVTHVVVDEIHERGMNEDFLLIVLKELLPRRPDLRLILMSATLNAELFSSYFDGAPTMHIPGFTYPVRARFLEDILEMTGYRLNPYNQIDDYGQEKTWKMQKQALAFRKRKSQIASAVEDALEVADFHGYSLRTRESLSCWCPDSLGFNLIEHVLSHIVKNERPGAVLVFMTGWDDINSLKDKLQTHPLLGDPSRVLLLACHGSMASTEQRLIFENPEGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLARALQPPEALSVQNAVEYLKIIGALDDNENLTVLGRKLSMLPVEPKLGKMLILGAIFNCLDPIMTVVAGLSVRDPFVMPADKKDLAESAKAQFSARDYSDHLALVRAYEGWKEAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFFYLLKDIGLVDHNSETYSRWSQEEHLVRAVICAGLFPGVSSVVDGHLKMLGGYLEFFMKPELANTYLRLKGELEELIQKKLLDPMFDTQSHDELLSAVRLVISEDHCDGRFVFGRRATPAPKVKEATNSKSSAGVEAENFKNQLQSLLNRAGHEVPTYKTRQLKNNQFRSTVIFNGLDFVGQPCSNKKQAEKSAAAEALLWLKGDMHSSRDVASHMSVLLKKSNKKDKKTSSKRAKWS 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05310 1128 FunFam Putative ATP-dependent RNA helicase DHX36 740 845 - -
Arst3g05310 1128 CDD DEXHc_RHA-like 314 474 - -
Arst3g05310 1128 Gene3D - 252 476 IPR027417 -
Arst3g05310 1128 Pfam Helicase conserved C-terminal domain 565 697 IPR001650 -
Arst3g05310 1128 MobiDBLite consensus disorder prediction 1109 1128 - -
Arst3g05310 1128 Pfam DEAD/DEAH box helicase 308 459 IPR011545 GO:0003676|GO:0005524
Arst3g05310 1128 SUPERFAMILY dsRNA-binding domain-like 1028 1095 - -
Arst3g05310 1128 SMART DRBM_3 1030 1093 IPR014720 -
Arst3g05310 1128 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1029 1094 IPR014720 -
Arst3g05310 1128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 304 1040 IPR027417 -
Arst3g05310 1128 SMART ha2_5 760 851 IPR007502 GO:0004386
Arst3g05310 1128 CDD SF2_C_RHA 562 706 - -
Arst3g05310 1128 PANTHER ATP-DEPENDENT RNA HELICASE 238 954 - -
Arst3g05310 1128 FunFam DExH-box ATP-dependent RNA helicase DExH3 560 716 - -
Arst3g05310 1128 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 564 738 IPR001650 -
Arst3g05310 1128 Gene3D - 561 716 IPR027417 -
Arst3g05310 1128 SMART helicmild6 592 698 IPR001650 -
Arst3g05310 1128 FunFam DExH-box ATP-dependent RNA helicase DExH3 252 476 - -
Arst3g05310 1128 Pfam Double-stranded RNA binding motif 1031 1092 IPR014720 -
Arst3g05310 1128 Gene3D - 740 841 - -
Arst3g05310 1128 Pfam Helicase associated domain (HA2) 761 839 IPR007502 GO:0004386
Arst3g05310 1128 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 308 475 IPR014001 -
Arst3g05310 1128 Gene3D - 1010 1096 - -
Arst3g05310 1128 MobiDBLite consensus disorder prediction 227 248 - -
Arst3g05310 1128 SMART ultradead3 296 484 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05310 Arst-Chr3 128155078 128164003 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g05310 3 128155078 128164003 Arst3g05310 3 128155078 128164003 ECH