Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g05309 ATGTTACAGAGCTACTTCAGATTCAGACTCACAACCACAACCGCCATGTCCCTCAGGCCTCTCAGGCCTCTCAGGCCCTCTCTTCCTTCCGCCACCTCCCACTTAATTGGCCTCAGGGCCTTTCACCTCCGCCCCACCATAGCCTCTCATCTTCGTCTCCACCCATGCTCCGCGGCGCCAACCGGGGCGGTTGAGCTGGAATGGAACGACAGGCAGCGCTTCAAGCAGAGGACCGTTGCTCTGCCGTTTTGGCGTCAACGCAACTCCAATTACGGCCGTTTTGCCTACCAAGACTTCTCCAGTGATGATGAATCCGACGTGGAACTTGCCTCTCCACGCTCTCCGGCTCAGCAACAGATGGGAGAGTCGACTCTTGAAAACATTGATGAGTGGAGATGGAAGCTGACCATGCTTCTCCGCAGTAACGAGGAGCAAGAAGTTGTGTCCAGGGAGAAAAAGGACCGGCGTGATTATGAGCAACTTTCAGCTTTAGCTACCAGAATGGATCTATACAGCCGACAATATGCAAGAGTTGTTGTCTTTAGTAAAGCACCTCTGCCAAATTACCGCCCTGATTTGGATGATAAACGTCCACAAAGAGAGGTAATCTTACCCTTTGGTATTCATAGAGAAGTAGATACTCATCTCCGTGCCCATCTTTCACAAAAGCCTACCAAAAGGCTAGGTTCTTTTGATGATTCTTTGCATAGATCAAGTGATGCTGGAAGTATTCACACCAATGACGGGATTTATGAGAAGCCAGTGCCTAGGATCCATAATTCTGTTGTCAAGGAGAAAATCCTTCAGCGAAGAAGTTTGGAACTGCGTAATAAGCAAGAAGATTGGCAGGGGTCTCCTGAAGGGCAAAGGATGCTCGAATTTCGTAGAAGTCTTCCTGCATTCAAAGAGAAAGATGCATTTTTGAAAGTCATTTCAAATAATCAGGTCATTGTTGTCTCAGGTGAAACTGGTTGTGGTAAGACCACACAACTTCCCCAGTACATACTAGAATCTGAGATTGAAGCTGGATGTGGTGCTGGATGTAACATAATTTGTACTCAGCCTAGAAGAATATCTGCTATGTCTGTTTCTGAAAGAGTTGCAGCAGAACGTGGGGAGAAATTGGGAGAATCTGTTGGCTACAAAGTTCGGTTGGAGGGTATGAAAGGAAGGGATACTCGTCTTCTTTTTTGTACCACAGGTGTATTATTGAGGAGACTACTAGTGGATAGGACTTTAAATGGTGTAACTCATGTTGTTGTTGATGAAATTCATGAACGTGGAATGAATGAAGATTTTCTTTTGATTGTCCTGAAGGAGCTTCTTCCTCGCCGTCCTGATTTGAGATTAATTTTGATGAGTGCAACCTTAAATGCTGAGCTTTTCTCTTCCTACTTTGATGGTGCTCCAACTATGCACATTCCTGGTTTTACATATCCAGTCCGAGCACGTTTTCTGGAGGATATTCTGGAAATGACTGGATATCGGTTGAATCCTTATAATCAAATTGATGACTATGGTCAAGAAAAAACATGGAAAATGCAGAAACAGGCTCTAGCTTTCCGGAAAAGAAAGAGCCAAATTGCTTCTGCTGTTGAGGATGCGCTAGAAGTTGCAGACTTCCATGGATATAGTCTACGCACTCGGGAGTCATTGTCCTGCTGGTGCCCTGACTCACTTGGTTTTAACCTTATTGAACATGTGCTTTCTCACATTGTCAAGAATGAAAGGCCAGGTGCTGTTTTGGTTTTTATGACTGGGTGGGATGACATAAACTCCTTGAAGGATAAGCTCCAAACTCATCCTTTGTTAGGAGATCCCAGCCGTGTCTTGCTTCTAGCATGTCATGGATCCATGGCCAGCACTGAGCAGAGGTTGATATTTGAAAACCCTGAAGGTGGGGTGAGGAAAATTGTTCTGGCAACTAATATGGCTGAGACTAGTATTACCATCAATGATGTTGTCTTTGTGGTTGATTGTGGTAAAGCTAAAGAGACATCATATGATGCACTAAACAACACTCCTTGTTTACTTCCATCTTGGATATCAAAAGCTGCTGCCCGGCAGAGAAGAGGAAGGGCTGGTCGTGTTCAACCTGGTGAATGCTACCATCTATATCCCAGATGTGTTTATGATGCTTTTGCTGATTATCAATTGCCCGAACTTTTGAGAACACCTTTGCAGTCCTTATGTTTGCAAATCAAAAGTTTACAACTTGGAAGCATATCTGAATTCTTAGCTAGAGCTCTCCAGCCACCAGAGGCGCTATCGGTTCAAAATGCTGTTGAGTATCTGAAGATAATTGGGGCCTTGGATGACAATGAAAATTTGACAGTTCTAGGGCGCAAGTTGTCAATGCTTCCTGTGGAGCCCAAACTCGGCAAAATGCTCATTCTGGGCGCTATCTTCAACTGTTTGGATCCCATAATGACTGTTGTTGCTGGTCTTAGTGTAAGGGATCCTTTTGTGATGCCGGCTGACAAGAAGGATCTTGCAGAGTCTGCTAAGGCCCAGTTTTCTGCTCGTGACTATAGTGATCATCTTGCACTTGTCCGAGCTTATGAGGGTTGGAAAGAGGCTGAAGCTCAGCAAGCTGGCTACGAGTACTGTTGGCGAAATTTTCTTTCTTCTCAAACACTTAGGGCCATTGACTCTCTTCGAAAGCAATTTTTTTACTTGCTTAAAGATATTGGGTTGGTTGATCACAATTCTGAGACCTACAGTAGATGGAGTCAGGAGGAGCATCTTGTCCGAGCTGTCATCTGTGCGGGTTTGTTTCCTGGAGTATCATCTGTTGTGAACAAAGATAAGTCAATAGCACTGAAAACAATGGAGGATGGCCAGGTTCTTCTGTATGGTAACTCTGTAAATGGTAGTGTACCCAAGATTCCATACCCATGGTTGGTGTTTAATGAAAAGGTGAAAGTGAATGCTGTATTCCTTAGGGATTCGACTGGTATATCTGATTCAGTGCTGCTCTTATTTGGTGGGAATATATCCAGAGGTGGATTGGATGGTCACCTAAAAATGTTGGGAGGTTATTTGGAATTTTTCATGAAACCTGAATTAGCTAACACTTACTTGCGGTTGAAGGGGGAGCTGGAGGAACTGATACAGAAAAAACTTCTGGATCCCATGTTCGATACACAATCGCATGACGAGCTTCTTTCAGCTGTTAGATTGGTGATATCTGAGGACCACTGTGATGGCAGATTCGTATTTGGTCGTCGGGCCACACCTGCACCCAAAGTAAAAGAGGCAACAAACTCCAAAAGTAGTGCTGGAGTAGAGGCTGAGAATTTTAAAAACCAGCTTCAGTCATTACTTAACAGAGCTGGACATGAAGTACCAACTTACAAAACAAGGCAACTGAAGAACAACCAATTCCGTTCCACTGTCATTTTTAATGGCTTGGATTTTGTTGGCCAGCCTTGCAGCAACAAGAAACAAGCAGAAAAATCTGCTGCTGCCGAGGCTCTTCTATGGCTGAAGGGTGATATGCATTCTTCACGTGATGTTGCCAGCCATATGTCTGTGCTTTTGAAAAAGAGCAACAAGAAAGATAAGAAAACTTCATCAAAACGTGCTAAATGGAGCTGA 3600 0.4428 MLQSYFRFRLTTTTAMSLRPLRPLRPSLPSATSHLIGLRAFHLRPTIASHLRLHPCSAAPTGAVELEWNDRQRFKQRTVALPFWRQRNSNYGRFAYQDFSSDDESDVELASPRSPAQQQMGESTLENIDEWRWKLTMLLRSNEEQEVVSREKKDRRDYEQLSALATRMDLYSRQYARVVVFSKAPLPNYRPDLDDKRPQREVILPFGIHREVDTHLRAHLSQKPTKRLGSFDDSLHRSSDAGSIHTNDGIYEKPVPRIHNSVVKEKILQRRSLELRNKQEDWQGSPEGQRMLEFRRSLPAFKEKDAFLKVISNNQVIVVSGETGCGKTTQLPQYILESEIEAGCGAGCNIICTQPRRISAMSVSERVAAERGEKLGESVGYKVRLEGMKGRDTRLLFCTTGVLLRRLLVDRTLNGVTHVVVDEIHERGMNEDFLLIVLKELLPRRPDLRLILMSATLNAELFSSYFDGAPTMHIPGFTYPVRARFLEDILEMTGYRLNPYNQIDDYGQEKTWKMQKQALAFRKRKSQIASAVEDALEVADFHGYSLRTRESLSCWCPDSLGFNLIEHVLSHIVKNERPGAVLVFMTGWDDINSLKDKLQTHPLLGDPSRVLLLACHGSMASTEQRLIFENPEGGVRKIVLATNMAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLQLGSISEFLARALQPPEALSVQNAVEYLKIIGALDDNENLTVLGRKLSMLPVEPKLGKMLILGAIFNCLDPIMTVVAGLSVRDPFVMPADKKDLAESAKAQFSARDYSDHLALVRAYEGWKEAEAQQAGYEYCWRNFLSSQTLRAIDSLRKQFFYLLKDIGLVDHNSETYSRWSQEEHLVRAVICAGLFPGVSSVVNKDKSIALKTMEDGQVLLYGNSVNGSVPKIPYPWLVFNEKVKVNAVFLRDSTGISDSVLLLFGGNISRGGLDGHLKMLGGYLEFFMKPELANTYLRLKGELEELIQKKLLDPMFDTQSHDELLSAVRLVISEDHCDGRFVFGRRATPAPKVKEATNSKSSAGVEAENFKNQLQSLLNRAGHEVPTYKTRQLKNNQFRSTVIFNGLDFVGQPCSNKKQAEKSAAAEALLWLKGDMHSSRDVASHMSVLLKKSNKKDKKTSSKRAKWS 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g05309 1199 Gene3D - 1081 1167 - -
Arst3g05309 1199 PANTHER ATP-DEPENDENT RNA HELICASE 238 1040 - -
Arst3g05309 1199 Gene3D - 252 476 IPR027417 -
Arst3g05309 1199 MobiDBLite consensus disorder prediction 1180 1199 - -
Arst3g05309 1199 CDD DEXHc_RHA-like 314 474 - -
Arst3g05309 1199 FunFam Putative ATP-dependent RNA helicase DHX36 740 845 - -
Arst3g05309 1199 FunFam DExH-box ATP-dependent RNA helicase DExH3 252 476 - -
Arst3g05309 1199 Gene3D - 561 716 IPR027417 -
Arst3g05309 1199 FunFam DExH-box ATP-dependent RNA helicase DExH3 560 716 - -
Arst3g05309 1199 Pfam Helicase conserved C-terminal domain 565 697 IPR001650 -
Arst3g05309 1199 SMART ha2_5 760 851 IPR007502 GO:0004386
Arst3g05309 1199 SMART DRBM_3 1101 1164 IPR014720 -
Arst3g05309 1199 CDD SF2_C_RHA 562 706 - -
Arst3g05309 1199 Pfam Helicase associated domain (HA2) 761 839 IPR007502 GO:0004386
Arst3g05309 1199 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 917 999 IPR011709 -
Arst3g05309 1199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 304 893 IPR027417 -
Arst3g05309 1199 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 564 738 IPR001650 -
Arst3g05309 1199 SMART helicmild6 592 698 IPR001650 -
Arst3g05309 1199 Pfam DEAD/DEAH box helicase 308 459 IPR011545 GO:0003676|GO:0005524
Arst3g05309 1199 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1100 1165 IPR014720 -
Arst3g05309 1199 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 308 475 IPR014001 -
Arst3g05309 1199 Gene3D - 740 841 - -
Arst3g05309 1199 MobiDBLite consensus disorder prediction 227 248 - -
Arst3g05309 1199 SMART ultradead3 296 484 IPR014001 -
Arst3g05309 1199 Pfam Double-stranded RNA binding motif 1102 1163 IPR014720 -
Arst3g05309 1199 SUPERFAMILY dsRNA-binding domain-like 1099 1166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g05309 Arst-Chr3 128155078 128164003 Tandem