Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g04427 ATGGGTTTGAGTTCCAAGCAGGTTTCAAGGAGTAGTAGTGGACTTGATTGGAACCAAGCCTTATTGGAATCACAGAAATTGGAGCTTCCAATTCCAAAGCCTCATCATATTATGAAGAAACAACAACAGAATCAATCATCATCGTCATCATCAGAGCCAATGAAGTGTCCAAGATGTGAATCTACCAACACAAAGTTCTGTTACTACAACAATTACAACAAGTCTCAGCCTCGCTATTTATGTAGAACTTGCAAGAGGCACTGGACCAAAGGTGGAACTTTGCGCAATGTTCCAGTTGGTGGTGGAAGAAAGAACAAAAGGGTCAAAAAATCAACCGCCACTGCAACCGCCACAGCCACCGCCACCACCTCTACTTGCACCACAAGCATCAGAATTCAAGCTCCTTCTCTTGCAATGGATGATCACAAAAACATAGCTTCTCCTTCTCCTTCTTCTTCTTCTTCCCTCTATCAAGGTCTGATTCGTCCACCACCTTTCCTACTACATCAGAATCTGATGAATAATATTATTACCAGAGGCATAACATCAGAAACTAAAGGTTATGGTATTGGTATTGGTATTGGTAATAATAACAATAATACCAATGGCATCTTTCTTGGTTCATCAGCTTTGTCTCTTCCTCAGAATCAAGGCTTGCTTATCCCCTTCTCAACTGCATCAAGCTCTAATTTTGACACAAACCCATGTTTAGTTTCAGTTTCAACCTCTTTGCAATCCGCCAATGTTTATAATAACTGTGGTGGTGAAGAGTTTAAAGCAATAGAGGAACCAAGCATGCACAGCATAATGGCTACCACTACTTCTACACAACCATGGGAGATACCAGCAGCAACAATGGAAATGTCAAACTATTGGGGTTGGGAGGACATTGATTCTTTGGTCTCTACTGATCCGAACAATAATCATCCTTGGGATGATTCTGATGATATCAAACCCTGA 960 0.4115 MGLSSKQVSRSSSGLDWNQALLESQKLELPIPKPHHIMKKQQQNQSSSSSSEPMKCPRCESTNTKFCYYNNYNKSQPRYLCRTCKRHWTKGGTLRNVPVGGGRKNKRVKKSTATATATATATTSTCTTSIRIQAPSLAMDDHKNIASPSPSSSSSLYQGLIRPPPFLLHQNLMNNIITRGITSETKGYGIGIGIGNNNNNTNGIFLGSSALSLPQNQGLLIPFSTASSSNFDTNPCLVSVSTSLQSANVYNNCGGEEFKAIEEPSMHSIMATTTSTQPWEIPAATMEMSNYWGWEDIDSLVSTDPNNNHPWDDSDDIKP 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g04427 319 MobiDBLite consensus disorder prediction 95 116 - -
Arst3g04427 319 MobiDBLite consensus disorder prediction 28 55 - -
Arst3g04427 319 MobiDBLite consensus disorder prediction 38 55 - -
Arst3g04427 319 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 41 224 IPR045174 GO:0003700|GO:0006355
Arst3g04427 319 Pfam Dof domain, zinc finger 53 106 IPR003851 GO:0003677|GO:0006355
Arst3g04427 319 ProSitePatterns Zinc finger Dof-type signature. 56 92 IPR003851 GO:0003677|GO:0006355
Arst3g04427 319 ProSiteProfiles Zinc finger Dof-type profile. 54 108 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g04427 Arst-Chr3 119580119 119581591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g04427 54 118 C2C2-Dof Transcription Factor Family AT5G60200 68.182 2.74e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst3g04427 zf-Dof 7.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g04427 - - gmx:100791855 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g04427 3 119580119 119581591 Arst10g00392 10 3181284 3183137 PCT