Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g02257 ATGGGAGAAACACAGCATCACCGTCCAACATCGTCAAGACTTGGGATGAGGGCCGTGGCCGGAGGAGGAGGAGGAGGGGGAGAAATTGTGGAGGTCCAAGGAGGCCACATTGTGCGGTCCACCGGCCGGAAGGACCGACACAGCAAGGTCTGCACAGCCAAGGGCCCGAGGGACCGCCGTGTGCGACTCTCCGCACACACCGCCATCCAGTTCTACGACGTTCAGGACCGACTCGGCTACGACCGCCCAAGCAAGGCCGTCGACTGGCTCATCAAGAAAGCAAAGGCCGCCATCGACGAGCTCGCCGAGCTCCCCGCATGGAAACCAACTGCCACTACCACGACCGTCGCCGCCGCCGCCGCGGCCTCGAACTCAAATGTTGCTGTTCAGCAGCAGAAGCTCCGGGAGGAGGAGGAAAACCAACAGCTGAATCAAATCGTCCACCGCCAATCGACCACGGTGGACGACGCTATGGAAGCTTCTGGTAGCCGAAAGGCTACCGCACTGGTTGGTGGCAGTGGAAGAATCTCGGAATTTCAACCGCAACATTTGAACGACGATAACGGTAGTAGTGGCAAATACAACAGTGGCGGTTCTGGTTTCTTTCCGCCGACTTTGGACACTGATATAGCTGATACCATTAAGTCTTTCTTTCCGATGGTGGGGCCGGGGGAGGTTGCAACAACGACGTCGTCCTTTCATAACTATCCTCCACCGCCTGATTTGCTTTCGCCGATTCTTCTTCAGCACCACCAACAACAGCAGCAGCAGCCGCCACACCAACAGCATGTTCACGAGCAAGTGCTCTTCCAGCACCACCAAGAGGAACAGGAGCATGGACGATTGCAGAGAATGGTGGCTTGGAATAATGCCGCTGCAGATGCTAGTAGCAGTGGCCATGCCAGTGGATTCATCTTCAACTCGTCGGCGACGGCGGCTGTGCCGTCTCCTGCGATGTTTGGCCATGGCCAGTTTTTTCCTCAGAGGGGACCCCTTCAGTCCAGTAACACCCCTTCGTTTCGTGCTTGGATAGATCCTTCTTCGATCGCCACGGCTGCCATGACTGTGGATCACCACCACTATCTTTCACCGGCCGCGATCCATCAAGCTTCTATTGGGTTTGCCGGCTCTTCTTCCGGTAGCTTCTCTGGCTTCCGCATACCAGCACGAATTCAGGGTGCGGAGGAGCACGACGGCGTATCTGACAAGCCGTCCTCTGCTTCCTCCGATTCTCGCCATTGA 1242 0.57 MGETQHHRPTSSRLGMRAVAGGGGGGGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWKPTATTTTVAAAAAASNSNVAVQQQKLREEEENQQLNQIVHRQSTTVDDAMEASGSRKATALVGGSGRISEFQPQHLNDDNGSSGKYNSGGSGFFPPTLDTDIADTIKSFFPMVGPGEVATTTSSFHNYPPPPDLLSPILLQHHQQQQQQPPHQQHVHEQVLFQHHQEEQEHGRLQRMVAWNNAAADASSSGHASGFIFNSSATAAVPSPAMFGHGQFFPQRGPLQSSNTPSFRAWIDPSSIATAAMTVDHHHYLSPAAIHQASIGFAGSSSGSFSGFRIPARIQGAEEHDGVSDKPSSASSDSRH 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g02257 413 MobiDBLite consensus disorder prediction 38 56 - -
Arst3g02257 413 MobiDBLite consensus disorder prediction 37 56 - -
Arst3g02257 413 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 31 333 IPR005333 GO:0003700
Arst3g02257 413 Coils Coil 120 146 - -
Arst3g02257 413 MobiDBLite consensus disorder prediction 385 413 - -
Arst3g02257 413 ProSiteProfiles TCP domain profile. 43 101 IPR017887 -
Arst3g02257 413 Pfam TCP family transcription factor 42 150 IPR017887 -
Arst3g02257 413 MobiDBLite consensus disorder prediction 178 200 - -
Arst3g02257 413 MobiDBLite consensus disorder prediction 391 413 - -
Arst3g02257 413 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g02257 Arst-Chr3 28525532 28527409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g02257 9 413 TCP Transcription Factor Family AT1G53230 45.125 3.82e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Arst3g02257 TCP 1.3e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst3g02257 3 28525532 28527409 Arst8g02396 8 33140012 33142727 PCT