Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00342 ATGGTTTTCTCTTCTATTCCAGTCTATGTAGATCCTCCCAATTGGCAGCAGCAACCGAATCATCATCAAGCAAATGTCAATGATAATCCTCACTTACTTCCGCCGCTACCCCCACAGGTCCAGGCAGGACCTGTGGGAGGAGGTGGCGCAATTGCTGGCTCGATCAGACCTGGGTCAATGGCTGATCGAGCCAGGCTAGCAAAGATACCACCTCCAGAGGCTGCCCTCAAGTGTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTCAGCCCCGCCACTTCTGCAAGGCCTGTAGGCGTTACTGGACAAGAGGTGGTGCTCTGAGGAACGTTCCGGTGGGGGGTGGTTGCCGCCGTAACAAGAAGAACAAGAGGAGTAGTAGCCGCTCGAAATCTCCACCAAACAATAACAATGAAAAGCAACAATCTTCGAGTGCAATTCCTTCAAACAACATCCCTCCTCATGAGCTGATTGGTCATCAACCACCAAACCTTCCTTTCATGGCTTCTCTCCAGAATCATCTTAGCCGCTATGGAGTTGCTTCAAACATGGGTCTGAGCTTAACGGATCATCATCATCCTCAGATGGGGTTTGTTGGTAATTCTGCTTCTGCTATAGCTGCAAGTAATGGAGTAGTAGTGGATCAGTGGCGGCTGCAGCAGTTTCCGTTCTTAAACGGTTTTGATTCGAATTCTTCTTCAGCTGCAGTAGCATCATCAATATCATACCCTAATACTTTTCATCATGAAAATGATCAAGGTTCTTCAGGCTTGGTTGACATAGCTGGAAATTCTAGGGTTAATAATCAGATGCAACCACCAGTGAAAATGGAAGAGAACGGATCAAGACCAACAACAACAACCACAACCAACTTGAATGTCTCTCATCATCAATACTATTCTTGGAACACTGATATGTCAGCTCTAGCTGCTTCTTCTTCCACTCCTCATAATCTCTTATAA 966 0.4524 MVFSSIPVYVDPPNWQQQPNHHQANVNDNPHLLPPLPPQVQAGPVGGGGAIAGSIRPGSMADRARLAKIPPPEAALKCPXXXXXXXXXXXSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKNKRSSSRSKSPPNNNNEKQQSSSAIPSNNIPPHELIGHQPPNLPFMASLQNHLSRYGVASNMGLSLTDHHHPQMGFVGNSASAIAASNGVVVDQWRLQQFPFLNGFDSNSSSAAVASSISYPNTFHHENDQGSSGLVDIAGNSRVNNQMQPPVKMEENGSRPTTTTTTNLNVSHHQYYSWNTDMSALAASSSTPHNLL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00342 322 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 90 274 IPR045174 GO:0003700|GO:0006355
Arst3g00342 322 MobiDBLite consensus disorder prediction 131 153 - -
Arst3g00342 322 MobiDBLite consensus disorder prediction 13 27 - -
Arst3g00342 322 Pfam Dof domain, zinc finger 90 124 IPR003851 GO:0003677|GO:0006355
Arst3g00342 322 MobiDBLite consensus disorder prediction 268 294 - -
Arst3g00342 322 MobiDBLite consensus disorder prediction 111 168 - -
Arst3g00342 322 ProSiteProfiles Zinc finger Dof-type profile. 70 124 IPR003851 GO:0003677|GO:0006355
Arst3g00342 322 MobiDBLite consensus disorder prediction 13 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00342 Arst-Chr3 2499484 2501096 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00342 1 126 C2C2-Dof Transcription Factor Family AT2G37590 48.966 4.02e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst3g00342 zf-Dof 8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00342 - - aip:107629110 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01727 8 25738872 25740159 Arst3g00342 3 2499484 2501096 PCT