Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst3g00255 ATGGATCCTTCTAGTGGACAACAGAACCACCAGCAAATGGCAAACAATAATAACAATCAGTCACTAGAAAGCATGATGTTGGGTTGCACAAAACAAGAACAACAACAAGAGAAGAAGCCAAGGCCACAACCAGAACAAGCATTGAAATGTCCAAGATGTGATTCAACAAACACAAAGTTCTGTTACTACAACAACTACAGTCTCTCACAGCCAAGGTACTTCTGCAAATCTTGCAGAAGGTACTGGACAAAAGGAGGAACATTGAGGAATGTTCCAGTAGGTGGAGGCTGCAGAAAGAACAAAAGATCATGTTCTTCTTCATCAAAGAGAGCTCAAGATCAATTACCCTTTAACCCAGATCATAACCCTCTCATGAATTCTCTCCCTCCATTGTCATATGACTCTGAATTCACACTTGCATTGGCTAGGCTCCAAAAACAAACAGGTGGTGTGCATCTTGGTCTTGATGACCACCATGATCTCTCAATGTTGGTGAACCACACTAACACTAACACCAACACCACAACACAACAACAACAACAACAACAACAAGGATTCTTGGATGCACTTAGAAGCAATGGATTCAACAGCAACACCATGCATAGTGATTTGTACTATGGTGGAAATGGGGACATGGGTGAGGTTTATAATGAGATTATGCTTCCTTATGAGCAAGAAATGAGTGTTGAAACAACTCAAGCAGTTACTGTCACAACCACAAAGCAAGAACTCTGCAATGTTAGTTATAATTGCAATAATACTAATAATAATAATAAGGTTTTGTGGGGTTTTCCATGGCAGATCAATGGAGAAACAAACATGCTTGGAGATATTGATTTATCAAGAGCAAGTTGGAATGGTAATGGTCCTCTCACTACTCCATTATCTTGGCATGGACTTCTCAATAGTCCCCTAATGTAG 921 0.4007 MDPSSGQQNHQQMANNNNNQSLESMMLGCTKQEQQQEKKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSCSSSSKRAQDQLPFNPDHNPLMNSLPPLSYDSEFTLALARLQKQTGGVHLGLDDHHDLSMLVNHTNTNTNTTTQQQQQQQQGFLDALRSNGFNSNTMHSDLYYGGNGDMGEVYNEIMLPYEQEMSVETTQAVTVTTTKQELCNVSYNCNNTNNNNKVLWGFPWQINGETNMLGDIDLSRASWNGNGPLTTPLSWHGLLNSPLM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst3g00255 306 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 217 IPR045174 GO:0003700|GO:0006355
Arst3g00255 306 MobiDBLite consensus disorder prediction 1 33 - -
Arst3g00255 306 MobiDBLite consensus disorder prediction 1 49 - -
Arst3g00255 306 ProSiteProfiles Zinc finger Dof-type profile. 48 102 IPR003851 GO:0003677|GO:0006355
Arst3g00255 306 ProSitePatterns Zinc finger Dof-type signature. 50 86 IPR003851 GO:0003677|GO:0006355
Arst3g00255 306 Pfam Dof domain, zinc finger 46 102 IPR003851 GO:0003677|GO:0006355
Arst3g00255 306 MobiDBLite consensus disorder prediction 97 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst3g00255 Arst-Chr3 1841265 1842828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst3g00255 46 306 C2C2-Dof Transcription Factor Family AT2G28510 43.011 7.90e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst3g00255 zf-Dof 6.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst3g00255 - - gmx:100799737 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst8g01812 8 26472248 26473610 Arst3g00255 3 1841265 1842828 PCT