Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04169 ATGGTGAAGCTATGTGGAATAGGGGCAGGGTATGTAGGGGGTCCTACAATGGCAGTTATTGCTCTAAAATGCCCCTCCATTGAAGTGGCTGTGGTTGACATATCTCAATCTCGCATATCAGCATGGAACAGTGACAAACTCCCAATCTATGAGCCTGGCCTAGAAAATGTGGTGAAACAATGCAGAGGGAAAAATCTCATCTTCAGCACAGATGTGGAGAGGCATGTCCAAGAAGCTGACATCATCTTTGTGTCGGTGAACACGCCGACAAAGGCGAGAGGCCTTGGAGCCGGCAAGGCGGCTGACTTGACTTATTGGGAGAGCGCAGCCCGGATGATCGCTGATGTGTGCACCTCAGACAAGATTGTTGTTGAAAAATCTACTGTCCCGGTGCGCACGGCCGAGGCAATAGAACAAATCTTAGCACATAAGAGCAAGGGAATCAAGTATCAGATTCTGTCGAATCCAGAGTTTCTTTCAGAGGGGACAGCTGTACAGGACCTTCTAGAACCTGACAGGGTCCTAATTGGAGGGAATGAAGGCCCTGAAGGCCAAGAAGCAATCAAGAAACTGAAGGATATATATGCTCATTGGGTGAGTGAAGATAAAATCATAACAACAAACATTTGGTCTGCAGAACTTTCCAAGTTAGCTGATAATGCATTCTTGGCTCAAAGGATCTCATCAATCAATGCAATGTCAGCACTGTGTGAGGCCACTGGTGCTCAAGTCTCTCAGGTTTCCCTTGCACTAAGCAAGAACCCGAAAATCGGGCCGAGATTCCTGAATGCCAGTGTTGGCTTTGGTGGTTCTTGTTTCCAGAAGGACATACTCAATTTGGTGTATATTTGTGAATGTAATGGCCTTGTCGAGGTGGCGAATTACTGGAAGCAAGTGATCAAGGTGAATGACTACCAGAAGAGCCGATTCGTCCAACGAGTCGTGTCATCCATGTTCAACACAGTTTCTGGTAAGAAGATTGCAGTTCTTGGATTTGCATTCAAGAAGGACACCAGTGACACTAGAAAAACTCCTGCTATTGATGTTTGCAAAGGTCTTTTAGGTGATGATGCATGCTTGAGCATATATGATCCGCGAGTGAGCGCGGATCAGATCAAGAAGGATTTGTCAATGAATAATGTTCAATGGGACCATCCAATTCACCTGCAGCCATTGAGTTCTAGCTCTTCCAATGGCTTGGAACATGTTGACATAGCTGAAGATGCTTATGAGGCAACTAAGGATGCTCATGGTATATGCATTCTTACAGAGTGGGATGAGTTTAAGGGAATTGATTTCCAGAGAGTGTTTGATGACATGCAGAAGCCAGCATTTGTTTTCGATGGTAGGAACATTTTGGATGTTGGGAAACTGAGGGAGATTGGGTTCATTGTTTACTCAATTGGGAGCCCAGTAGAACAATGGCTCAACAACTCTGTCAATTCAGCAGTGCCCTTTTGA 1461 0.4538 MVKLCGIGAGYVGGPTMAVIALKCPSIEVAVVDISQSRISAWNSDKLPIYEPGLENVVKQCRGKNLIFSTDVERHVQEADIIFVSVNTPTKARGLGAGKAADLTYWESAARMIADVCTSDKIVVEKSTVPVRTAEAIEQILAHKSKGIKYQILSNPEFLSEGTAVQDLLEPDRVLIGGNEGPEGQEAIKKLKDIYAHWVSEDKIITTNIWSAELSKLADNAFLAQRISSINAMSALCEATGAQVSQVSLALSKNPKIGPRFLNASVGFGGSCFQKDILNLVYICECNGLVEVANYWKQVIKVNDYQKSRFVQRVVSSMFNTVSGKKIAVLGFAFKKDTSDTRKTPAIDVCKGLLGDDACLSIYDPRVSADQIKKDLSMNNVQWDHPIHLQPLSSSSSNGLEHVDIAEDAYEATKDAHGICILTEWDEFKGIDFQRVFDDMQKPAFVFDGRNILDVGKLREIGFIVYSIGSPVEQWLNNSVNSAVPF 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04169 486 SMART UDPG_MGDP_dh_C_a_2_a 328 455 IPR014027 GO:0016616|GO:0051287
Arst1g04169 486 FunFam UDP-glucose 6-dehydrogenase 209 240 - -
Arst1g04169 486 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Arst1g04169 486 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 201 IPR036291 -
Arst1g04169 486 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 466 IPR036220 -
Arst1g04169 486 PIRSF UDPglc_GDPman_dh 2 470 IPR017476 GO:0016616
Arst1g04169 486 FunFam UDP-glucose 6-dehydrogenase 241 481 - -
Arst1g04169 486 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 185 IPR001732 GO:0016616|GO:0051287
Arst1g04169 486 Gene3D - 209 240 - -
Arst1g04169 486 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 209 309 IPR008927 -
Arst1g04169 486 PIRSF UDPglc_DH_euk 1 482 IPR028356 GO:0003979
Arst1g04169 486 Gene3D - 241 483 - -
Arst1g04169 486 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 474 IPR028356 GO:0003979
Arst1g04169 486 FunFam UDP-glucose 6-dehydrogenase 1 208 - -
Arst1g04169 486 NCBIfam nucleotide sugar dehydrogenase 4 451 IPR017476 GO:0016616
Arst1g04169 486 Gene3D - 1 208 - -
Arst1g04169 486 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 454 IPR014027 GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04169 Arst-Chr1 103893395 103895987 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g03813 4 116944117 116946901 Arst1g04169 1 103893395 103895987 ECH
Arst1g04169 1 103893395 103895987 Arst1g04169 1 103893395 103895987 ECH