Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g04062 ATGGCCCAAGACCCAGCTTCTGGTGCTGATTCGCCTCGTACGAGGCGTTATGGCCTACTACGGGACCAAGTTCAACTGGTTAAAAGAAAGGATTGTGATCGCTATGAAATTGTTCCAATCCAGGATTCCTTGTCGTTTGAGAAAGGATTTTTCATCGTGATTCGTGCATGCCAGTTGTTGGCTCAAAAGAATGATGGGATCATATTAGTAGGACTTGCAGGTCCCTCTGGAGCAGGCAAAACTGTTTTCACTGAGAAGGTCAACAATTTTATGCCAAGCTTAGCCGTCATCACAATGGACAATTATAACGATTCTAGTCGAATCATAGATGGCAATTTTGATGACCCTCGTTTGACGGATTATGATACTTTGCTTGAAAATATAATGGGTCTTAAAGAAAGGAAAGCAGTACAGGTTCCAATATATGATTTCAAGACTAGTTCTCGCGTAGGTTACAGGACTGTTGAAGTCCCTAGTTCCCGCATTGTCATCATAGAAGGCATTTATGCCTTAAGTGAAAAATTACGACCTTTGCTTGATCTTCGAGTTTCGGTCACTGGGGGAGTTCACTTTGACCTTGTCAAGCGTGTGCTGCGTGACATTCAACGTGCTGGTCAAGAGCCTGAAGAAATCATTCATCAAATCTCTGAAACGGTATATCCTATGTATAAAGCTTTTATTGAGCCTGATCTTCAAACAGCACATATAAAAATTATTAACAAGTTTAATCCGTTCTCTGGATTCCAGAATCCCACCTACATATTGAAGTCACTAAAAGCTGTGACAGAGGATCAAATCAAGTCAGTTATTGCTGCTGAGCATACTGAGACGAGAGAGGAAACATATGACATATATCTTCTACCACCAGGGGAAGACCCTGAAGCATGTCAATCATACCTGAGGATGAGAAACCGCGATGGGAAGTATAATCTCATGTTTGAGGAATGGGTCACAGATATTCCATTCATAATATCACCCAGAATAACATTTGAGGTCAGCGTGCGCCTTCTAGGAGGGTTGATGGCATTGGGTTACACAATTGCAGCTATACTAAAACGAAGCAGCCATGTCTTTTCCGATGATAAGGTGACTGTAAAAACTGATTGGCTCGAACAAGTTAACCGCCTATATGTTCAGGTTCAAGGGAAAGATAGAAACTATGTTAAACTTGTTGCAGAGAAACTGGGATTGGATGGTTCATATGTTCCTCGCACTTACATAGAACAAATTCAGCTAGAAAAGCTTGTTAATGATGTAATGGCACTGCCAGAGGATCTTAAGACAAAGCTCAGCATTGATGATGATATGGTTTCAAGCCCTAAAGAAGCCCTTTCTCGAGCTTCTGCTGATAGGAGAATGAAGTATCTAAATCGTGGTATTTCTCACTCATTTTCAACTCAGAGAGAGAAGCATCTATCTAAGTTGACTAGACTAGCTATAAATAACAGAAGATTTGATGGGAGAGCTCTTGAATCACCTGCGCCAGTTGCCAACCAAGGAGTCATCACTCAGCTTTCTGAACAAATATCCACATTAACTGAAAGAATGGATGAGTTCACGAATCGTATTGAGGAGCTAAATTCAAAGTTTGCATCCAGAAAAGCCAGTCAACAGAACATAGCCTTGCCTGCTGAAGCCTGCAATGGCTCAGGTCACACTTCTCTTTTTGTAACTGGATTGGGAAATGGTTCATTGACAAGATCATTGCTGCCTCATTCTTCATCGTCTTCCCAATTAGCTAGGGATGCTCCCCTGATGGAAGAGGTTTTGCTTGTTGCACGAGGACAGCGGCAAATTATACATCAACTAGACTCTCTAAGTACTCTGTTGCACGAATACTGCGGTGAAAGGTCGCGACACGGAAGGACAGACCAGACAAACAGAATGCACGAAGTGGAAACCATTGCCATCCCCCTGGTTCTGACTTTGGCCATTGGTGCTGTTGGTGTCTTCTTGTTCAGGGGTTTCACATCCCAAAAATAA 1983 0.4231 MAQDPASGADSPRTRRYGLLRDQVQLVKRKDCDRYEIVPIQDSLSFEKGFFIVIRACQLLAQKNDGIILVGLAGPSGAGKTVFTEKVNNFMPSLAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLENIMGLKERKAVQVPIYDFKTSSRVGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSLKAVTEDQIKSVIAAEHTETREETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDIPFIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHVFSDDKVTVKTDWLEQVNRLYVQVQGKDRNYVKLVAEKLGLDGSYVPRTYIEQIQLEKLVNDVMALPEDLKTKLSIDDDMVSSPKEALSRASADRRMKYLNRGISHSFSTQREKHLSKLTRLAINNRRFDGRALESPAPVANQGVITQLSEQISTLTERMDEFTNRIEELNSKFASRKASQQNIALPAEACNGSGHTSLFVTGLGNGSLTRSLLPHSSSSSQLARDAPLMEEVLLVARGQRQIIHQLDSLSTLLHEYCGERSRHGRTDQTNRMHEVETIAIPLVLTLAIGAVGVFLFRGFTSQK 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g04062 660 Pfam CYTH domain 272 406 IPR023577 -
Arst1g04062 660 SUPERFAMILY CYTH-like phosphatases 263 409 IPR033469 -
Arst1g04062 660 PANTHER URIDINE KINASE 19 425 - -
Arst1g04062 660 Coils Coil 502 529 - -
Arst1g04062 660 Gene3D - 256 415 - -
Arst1g04062 660 CDD UMPK_like 69 241 - -
Arst1g04062 660 ProSiteProfiles CYTH domain profile. 250 412 IPR023577 -
Arst1g04062 660 PRINTS Uridine kinase signature 67 84 - -
Arst1g04062 660 PRINTS Uridine kinase signature 226 239 - -
Arst1g04062 660 PRINTS Uridine kinase signature 134 149 - -
Arst1g04062 660 PRINTS Uridine kinase signature 190 200 - -
Arst1g04062 660 Pfam Phosphoribulokinase / Uridine kinase family 70 238 IPR006083 GO:0005524|GO:0016301
Arst1g04062 660 Gene3D - 68 250 IPR027417 -
Arst1g04062 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 238 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g04062 Arst-Chr1 102517891 102524475 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g04062 68 238 PRT Gene Family AT5G40870 26.111 1.56e-14 74.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g04062 1 102517891 102524475 Arst1g04062 1 102517891 102524475 ECH
Arst5g04111 5 102846216 102855429 Arst1g04062 1 102517891 102524475 PCT