Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01390 ATGTCTCCCACAACTCCCTCCCTTCTCGACACCCTCCTCTGCCAAGAAGAACACGACGACACCTTTGACGACACCCAAAACGACGCGTCGTTCCACCTCAACGACAACCACCACGACGAATCACCGTCGTTTTGCCCCGCAAAGCTCCAATCTTTTCCTCATCCCGTTCTGCATGACAACGACCTGTTCTGGGAACACGACGAGCTCGCCTCCTTAATCTCCAAAGAGGAAGAGACCCACGCCGCCGCTGGTAACGACGACGACCACCGTGGACTTCTAGATGGGCTTCGAGTTGGGCCCGTTGGCTGGATCACTAACGTGTGTGCGCACTATGGGTTTTCAGCTTTGACCACCGTTCTCGCCGTTAACTACTTCGACAGGTTCGTCACGAGCCTCACGTTTCAAAGGGATAAGCCATGGATGACTCAGTTAACGGCGGTTGCGTGCTTGTCAATCGCTGCAAAGATGGAAGAGACACATGTGCCCCTCCTCTTAGACCTCCAAGTGGAAGAATCGAGGTTTGTGTTTGAAGCAAAGACAATACAAAGAATGGAGCTTCTTGTGTTGTCTACTCTCAAATGGAAGATGCATCCGGTGACCCCAATTTCTTTTTTTGAACACATTGTAAGAAGGCTTGGCCTCAAGAGTCGCTTGCATTGGGAATTTCTATGGCGGTGCCAGCGGGTTCTTCTTGGCGTCATTGCCGATTCAAGGGTTATGAGTTATCTTCCATCTACATTGGCTGCTGCTACGATGATCCATGTTATTAAAGAGATTGAGCCATTTAATGCAACTAAGTACATTAGTGAACTTCTGGGACTACTCAAGATTAGTGAGGAACAAGGGAACCAGTGCTACAAACTCTTGCTGAAATCATTAGTTTGTGAAGAAGGTATTACTGACGGTCTTCACCAGATGCACAAGCGCAAGCGCAAGCGCGAATCTGCCCCGAGTAGCCCAGGAGGTGTCATTGATGCTTCTTTCAGTTGTGATAGCTCAAACGATTTGTGGGCCGTTGCGGCATCGTCGGTTTCACATTCGATGGAGCCGCTGTTTAAGAGGAGCAGAGCTAAGGACCAGCAGATGAGACTGCCTTCTGTTAGTCGCGTGTCTATCGATGTTCTTAATAGCCCTCATTAA 1140 0.4947 MSPTTPSLLDTLLCQEEHDDTFDDTQNDASFHLNDNHHDESPSFCPAKLQSFPHPVLHDNDLFWEHDELASLISKEEETHAAAGNDDDHRGLLDGLRVGPVGWITNVCAHYGFSALTTVLAVNYFDRFVTSLTFQRDKPWMTQLTAVACLSIAAKMEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWKMHPVTPISFFEHIVRRLGLKSRLHWEFLWRCQRVLLGVIADSRVMSYLPSTLAAATMIHVIKEIEPFNATKYISELLGLLKISEEQGNQCYKLLLKSLVCEEGITDGLHQMHKRKRKRESAPSSPGGVIDASFSCDSSNDLWAVAASSVSHSMEPLFKRSRAKDQQMRLPSVSRVSIDVLNSPH 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01390 379 Pfam Cyclin, N-terminal domain 72 196 IPR006671 -
Arst1g01390 379 CDD CYCLIN_AtCycD-like_rpt1 101 194 - -
Arst1g01390 379 PANTHER CYCLINS 72 294 IPR039361 -
Arst1g01390 379 Gene3D - 95 197 - -
Arst1g01390 379 SUPERFAMILY Cyclin-like 63 197 IPR036915 -
Arst1g01390 379 FunFam D6-type cyclin 90 197 - -
Arst1g01390 379 CDD CYCLIN_AtCycD-like_rpt2 199 289 - -
Arst1g01390 379 FunFam CYCLIN D32 198 287 - -
Arst1g01390 379 SMART cyclin_7 102 190 IPR013763 -
Arst1g01390 379 SMART Cyclin_C_2 199 321 IPR004367 -
Arst1g01390 379 Pfam Cyclin, C-terminal domain 199 297 IPR004367 -
Arst1g01390 379 Gene3D - 198 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01390 Arst-Chr1 15613560 15615777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01390 61 369 Core Cell Cycle Gene Families AT5G67260 50.955 3.79e-101 303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00815 5 7219276 7221162 Arst1g01390 1 15613560 15615777 ECH
Arst8g01353 8 18341402 18342686 Arst1g01390 1 15613560 15615777 ECH
Arst6g04066 6 108849227 108851924 Arst1g01390 1 15613560 15615777 ECH
Arst1g01390 1 15613560 15615777 Arst1g01390 1 15613560 15615777 ECH
Arst1g01390 1 15613560 15615777 Arst5g00815 5 7219276 7221162 PCT