Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst1g01334 ATGGACACAATGATGATGCAAGTAGAAAGGTTACCTGAATTCTCCCAATCCTTTTACACCTCCATTCCCAATCAAGGAACTGACTTCTCCGGTGCCCAAACCATATTCAACGCACCACCAGCACCGCCGTGTTTGATTGATCCACCGCCGTCCAACAACGTCAACTTCCCCATCCAACACCAACCGATTGCATTCAGGAACCCTTACCATTGTTCTTCCTCATCGTCGGCGGAGAAGAAGAGTTCAATGGCGGCAATGAGAGAAATGATATTCCGAATAGCGGTTATGCAGCCGGTCCACATAGACCCGGAATCCGTAAAGGCGCCGAAGCGTAGGAACGTGAAGATCTCGAAGGATCCGCAGAGCGTGGCGGCGAGGCACCGGAGAGAAAGGATAAGCGAGAAGATAAGGATCTTGCAGCGGTTGGTGCCAGGTGGCACCAAAATGGACACTGCTTCTATGTTGGATGAGGCTGTGCACTACGTGAAGTTCTTGAAGAAGCAGGTGCAGACGCTGGAACAAGCAGAAGCAAGTAGAATAAGAAGAACCCTTGGTGTTGGGTTTTCTTCTTCTAATAACAGTGGCAATCATGTGAATTACGATGCTTTTTCTTTCAAGGGTAGTAGTAGTAGTTGCCAACAACTTTGTCATAATATTTTTTGA 663 0.4781 MDTMMMQVERLPEFSQSFYTSIPNQGTDFSGAQTIFNAPPAPPCLIDPPPSNNVNFPIQHQPIAFRNPYHCSSSSSAEKKSSMAAMREMIFRIAVMQPVHIDPESVKAPKRRNVKISKDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKKQVQTLEQAEASRIRRTLGVGFSSSNNSGNHVNYDAFSFKGSSSSCQQLCHNIF 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst1g01334 220 FunFam BHLH transcription factor 119 183 - -
Arst1g01334 220 SMART finulus 122 171 IPR011598 GO:0046983
Arst1g01334 220 CDD bHLH_AtIND_like 117 173 - -
Arst1g01334 220 Gene3D - 115 184 IPR036638 GO:0046983
Arst1g01334 220 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 55 211 IPR045843 GO:0003700|GO:0006355
Arst1g01334 220 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 116 165 IPR011598 GO:0046983
Arst1g01334 220 Pfam Helix-loop-helix DNA-binding domain 125 165 IPR011598 GO:0046983
Arst1g01334 220 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 120 175 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst1g01334 Arst-Chr1 13662847 13663880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst1g01334 1 174 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 60.753 4.73e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst1g01334 HLH 1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst1g01334 - - gmx:100796649 215.698