Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03612 ATGGGTTCTAGGCCTCTTTTGATACCATCTCCAAGAACTCCAAATAGTATTCAAGAGCTTCCAACTATTCCAGTTTTTTCTGAACAACAAAAGTCAAAGTCAACTTCCTCTGAACAAGCAAGCAATGCTGTTATAAACAAAAGCAACTCATCGTCGATCCGCTCCGGCAGCTCCGGAAGGAGCGGCGGCGGCTCCGTCAAGGAAGTGAGCTTCAGCAATTCTTCATCCAAGCCGGTTCGATACGGCTCGTCAAAACGCGGCGGTGGCGGCGAGTCGGAGGGATTCAGCATGTCGCAGAAAGAACTGAGAGACGAAGATGCAAGAATTGTTTACATAAACAACCCGGAGAAGACGAACGAGATTCTTCAGTTCGCAGGGAATTCAATCCGAACCGCGAAATATTCAATCCTCACATTCATCCCTAGAAACCTCTTCGAACAGTTTCACAGAGTTGCGTATATTTATTTTCTCATAATCGCCATTCTCAATCAGCTTCCTCAGCTTGCAGTCTTCGGTAGAGGTGTTTCGATTCTCCCTCTGGCCTTTGTCCTGCTCGTTACCGCCGTCAAAGACGCCTTCGAGGATTGGCGGCGCCACCGCTCCGATAAAGTCGAGAACAACCGGCTAGCGTCGGTTTTGATTAACGGAAGCTTCGTGGAGAAGCCATGGAAGGACATAACCGTCGGCGAAATCGTTAAGATCGCCGCCAACGAAACGATCCCCTGCGATATTGTCCTTCTCTCCACCGCCGATCCTACCGGAGTTGCATATGTTCAGACTATAAATCTTGACGGAGAGTCAAATCTGAAAACTCGCTACGCCAAGCAAGAGACTCAATCCAAACAGAGGTTTGATTTCGGTGGAATAATCAAGTGCGAGAAACCGAATCGGAACATTTATGGATTCCAAGCTAACATGGAAGTTGATGGAAAGAAACTGTCTCTTGCATCATCGAACATTGTGCTTAGAGGATGCGAGCTTAAGAACACAAGCTGGGCTTTGGGAGTTGCTGTTTACTGTGGCAGTGAGACTAAAGCTATGCTCAACAGCTCCGGTGCGCCGTCGAAGAGAAGCCGGCTCGAGACTCGAATGAATTCGGAGATCATCATGCTCTCTTGCTTCCTTGTTGCTTTGTGTACGGTCACGTCCGTTTGTGCTGCGGTTTGGTTGAAGCGCCACAAAGACGAGCTTGATTTGATGCCGTATTACCGGAAGCTGAGCTTCTCCAGTGGGAAACCGAAGAAGTATAAGTATTATGGTTGGTTTTGGGAGATAATTTTCACATTCCTCATGTCAGTTATAGTTTTCCAGGTTATGATCCCAATTTCATTGTACATTTCGATGGAGCTTGTTCGTGTTGGCCAGGCCTATTTCATGATCAGAGATGATAGAATGTATGATAGGGCTACCAAGTCAAGGTTTCAGTGTAGGGCTTTGAATATCAATGAAGATTTGGGGCAGATTAAGTATGTCTTTTCGGATAAAACTGGTACTCTTACTGAGAACAAGATGGAATTCCAGTGCGCCAGCATCTGGGGAGTTGATTACAGTTCGACGAAATCTGGCCTCGAGATTCAACCTGGTGAATACTTCACGCAAGTAGATGGAAAGGTGTTGAGGCCAAAGATGAATGTGAAAGTAAATCCAGAGCTTTTGGCATTATCAAGAAGTGGAATTGAGCATAAGGAGGGAAAACGGATCTATGATTTCTTTCTAGCACTGGCAAGCTGCAATACCATTGTTCCTATTATTGTTGATACCCCTGATCATGATGTCAAGCTGATAGATTACCAAGGGGAATCACCAGATGAACAAGCATTGGCATACGCAGCCGCTGCCTATGGTTTTATGCTTATAGAACGAACCTCGGGCCATATAGTCATTGATATTCAAGGAGAAAGACACAGGTTAGTTAGTTAGTTAAATAACTTCAAAACTGATCAAAGCTGATTAGAAGTTAGTGAATCACTTGTTACTTCCAATGCATCAGTTTTATTGGGCAGCCCTGACAATTCAGTGAAAATTTTCGTGAAAGGAGCGGATACATCTATGCTAAATGTGATAGATAAATCATCTAACATGGACATTATAAGAGCAACTGAAGCTCATCTTCACTCTTATTCCTCAATGGGTTTAAGAACCCTTGTGATTGGAATGAGGGATTTAAATGCTTCAGAGTTTGAGCAATGGCACACTGCCTTTGAGGCAGCGAGCACCTCTTTGTTTGGCAGGGCCGCCATGCTTCGCAAGGTTGCTGTCAATGTAGAGAGAAACCTCTGCATCTTAGGTGCATCGGCTATCGAAGACAAGCTTCAGCAGGGTGTGCCGGAATCCATTGAGTCTCTAAGGACAGCTGGAATAAAAGTATGGGTGCTAACCGGAGACAAACAAGAAACTGCTATATCAATTGGATACTCATCAAAGCTTCTAACAAACAGAATGACTCAAATCATAATCAATAGCAAAAATAGAGAGTCGTGTAGAAAGAGTTTGCAAGATGCCATTGTTTCAAACAAGATTGAAGGAGGTTTTGATGCAATGACAAGTCAGATAGCATTGATCATTGATGGTACTAGCCTCGTATATGTTCTTGATAGTGAACTAGAGGAGCAGTTATTTAAACTTGCAAGTAGATGTTCTGTTGTTCTCTGTTGTCGAGTGGCGCCGCTGCAGAAGGCCGGCATAGTTGCCCTTGTTAAGAAGAGGACAGCCGAAATGACGCTTGCCATTGGAGACGGTGCTAATGATGTCTCCATGATTCAAATGGCTGATGTTGGAGTTGGCATCAGCGGCCAAGAGGGCCGGCAAGCCGTAATGGCGTCCGATTTCGCCATGGGCCAGTTTAGGTTTATAGTTCCTCTCTTGTTGATTCATGGACACTGGAATTACCAGCGGCTTGGCTACATGATACTCTACAACTTTTATAGAAATGCTGTCCTTGTTCTTGTCCTATTTTGGTATGTGCTCTACACTGCCTTCACTTTAACAACTGCCATAAATGAATGGAGCACCACGTTATATTCAATAATATACAGCTCATTGCCAACAATCATAGTTGGTATTCTTGACAAGGATCTTGGAAAAAGGACTCTCCTCAAGTATCCTCAGCTCTATGGGGCTGGGCAGAGAGACGAGGCATACAACAAGAAGCTATTTATTTTGACAATGCTCGACACTTTATGGCAAAGCATGGTAATCTTTTGGGCACCCCTCTTTGCATATTGGAGCACTGATGTTGATGTTGGAAGCATTGGGGATCTCTGGACACTAGCGGTGGTTATTTTGGTAAATTTACACTTGGCCATGGATGTCTTCAGGTGGAATTGGTTGACTCATTTTTCCATATGGGGGTCAATTGTTGCCACTTTCATTAGTGTCATGGTCATTGATGCTATACCCACGTTTCCTGGCTACTGGGACTTCTTTAATGTTGCAAGCACAGGATTGTTCTGGTTATTGTTGCTTGGAATCATCATAACAGCATTGCTTCCTCGTTTCCTTGTAAAATTCATTTGTCAATATTACTTTCCCAGTGACATTCAGATTTCAAAAGAAGCTGAGAAGATTAATGGGAATCAAATTCAAAGAGAAAATTTTGAAAGAGGACAAATAGAAATGCTTCCTATCTCAGATGTCCCACCAAGATGA 3648 0.4389 MGSRPLLIPSPRTPNSIQELPTIPVFSEQQKSKSTSSEQASNAVINKSNSSSIRSGSSGRSGGGSVKEVSFSNSSSKPVRYGSSKRGGGGESEGFSMSQKELRDEDARIVYINNPEKTNEILQFAGNSIRTAKYSILTFIPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAFEDWRRHRSDKVENNRLASVLINGSFVEKPWKDITVGEIVKIAANETIPCDIVLLSTADPTGVAYVQTINLDGESNLKTRYAKQETQSKQRFDFGGIIKCEKPNRNIYGFQANMEVDGKKLSLASSNIVLRGCELKNTSWALGVAVYCGSETKAMLNSSGAPSKRSRLETRMNSEIIMLSCFLVALCTVTSVCAAVWLKRHKDELDLMPYYRKLSFSSGKPKKYKYYGWFWEIIFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIRDDRMYDRATKSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSTKSGLEIQPGEYFTQVDGKVLRPKMNVKVNPELLALSRSGIEHKEGKRIYDFFLALASCNTIVPIIVDTPDHDVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIQGERHRLVSXLNNFKTDQSXLEVSESLVTSNASVLLGSPDNSVKIFVKGADTSMLNVIDKSSNMDIIRATEAHLHSYSSMGLRTLVIGMRDLNASEFEQWHTAFEAASTSLFGRAAMLRKVAVNVERNLCILGASAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNRMTQIIINSKNRESCRKSLQDAIVSNKIEGGFDAMTSQIALIIDGTSLVYVLDSELEEQLFKLASRCSVVLCCRVAPLQKAGIVALVKKRTAEMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFIVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLYTAFTLTTAINEWSTTLYSIIYSSLPTIIVGILDKDLGKRTLLKYPQLYGAGQRDEAYNKKLFILTMLDTLWQSMVIFWAPLFAYWSTDVDVGSIGDLWTLAVVILVNLHLAMDVFRWNWLTHFSIWGSIVATFISVMVIDAIPTFPGYWDFFNVASTGLFWLLLLGIIITALLPRFLVKFICQYYFPSDIQISKEAEKINGNQIQRENFERGQIEMLPISDVPPR 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03612 1215 Pfam Phospholipid-translocating P-type ATPase C-terminal 938 1178 IPR032630 -
Arst10g03612 1215 CDD P-type_ATPase_APLT_Dnf-like 126 1070 - -
Arst10g03612 1215 Gene3D - 652 739 IPR023299 GO:0000166
Arst10g03612 1215 SUPERFAMILY Calcium ATPase, transmembrane domain M 122 1177 IPR023298 -
Arst10g03612 1215 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 97 1190 - -
Arst10g03612 1215 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 97 1190 - -
Arst10g03612 1215 Gene3D - 758 950 IPR023214 -
Arst10g03612 1215 MobiDBLite consensus disorder prediction 1 98 - -
Arst10g03612 1215 SFLD C1.7: P-type atpase like 476 961 - -
Arst10g03612 1215 SFLD C1.7: P-type atpase like 476 961 - -
Arst10g03612 1215 MobiDBLite consensus disorder prediction 9 81 - -
Arst10g03612 1215 ProSitePatterns E1-E2 ATPases phosphorylation site. 494 500 IPR018303 -
Arst10g03612 1215 FunFam Phospholipid-transporting ATPase 758 950 - -
Arst10g03612 1215 Pfam Phospholipid-translocating ATPase N-terminal 110 175 IPR032631 -
Arst10g03612 1215 Pfam E1-E2 ATPase 210 449 - -
Arst10g03612 1215 SUPERFAMILY HAD-like 479 950 IPR036412 -
Arst10g03612 1215 SFLD p-type atpase 476 961 IPR044492 -
Arst10g03612 1215 SFLD p-type atpase 476 961 IPR044492 -
Arst10g03612 1215 FunFam Phospholipid-transporting ATPase 182 349 - -
Arst10g03612 1215 NCBIfam HAD-IC family P-type ATPase 422 513 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst10g03612 1215 NCBIfam HAD-IC family P-type ATPase 881 996 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst10g03612 1215 NCBIfam phospholipid-translocating P-type ATPase 124 1184 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Arst10g03612 1215 NCBIfam phospholipid-translocating P-type ATPase 124 1184 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Arst10g03612 1215 SUPERFAMILY Calcium ATPase, transduction domain A 207 346 IPR008250 -
Arst10g03612 1215 PRINTS P-type cation-transporting ATPase superfamily signature 785 795 - -
Arst10g03612 1215 PRINTS P-type cation-transporting ATPase superfamily signature 492 506 - -
Arst10g03612 1215 PRINTS P-type cation-transporting ATPase superfamily signature 910 929 - -
Arst10g03612 1215 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 498 774 IPR023299 GO:0000166
Arst10g03612 1215 Gene3D - 183 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03612 Arst-Chr10 103890676 103896625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03612 67 1215 Primary Pumps ATPases AT5G04930 66.897 0.0 1617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03612 10 103890676 103896625 Arst10g03612 10 103890676 103896625 ECH