Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00324 ATGGAACAAGAAGGAGAAGGAGGAGAAGACACGAACAAGAAGGAAAAGCAGAAGCAGTTAGTGGGAGATGCAAAAGCAGCACAAGTAGCAGTGGCAGTAAAGTGTCCAAGGTGTGATTCCATGAACACCAAATTCTGTTACTACAACAACTACAGCTTGTCGCAGCCTCGCTACTTCTGCAAAGCTTGCAAAAGGTACTGGACACATGGTGGAGCCTTGAGGAACGTTCCCGTTGGTGGCGGTTCTCGCAAGCCCAAGCGTGCCAAGCTTGCTGCTAATCCTTCCTCAGAAGCTACAGTTGTGGGGGTTCCTGCTCCTTCTTCTGTTTCTTCTGTCACTCCATTTTTCCAAGGTGATGTTGGTGGGTTTCTGTCTTCTTCGTCTCTTGGTGGTTCTGGTTTTAACAATGTGGGTTCCCATCATTTCTTTGATCAAATGATGATGGGCGGCGCAGATGAACAACAAAGATTCATGATGAATGAGAATAGGGCCCATCCTCTCATAAACCCTGATGGATCTATGTGGAGTACTTTGATGACCACCACCACTCACATCAACAATAACAATTCAAGTGGTGCTTCATCTTTTGCTTCTTCTGCTTCTGATGCTGCTGCTGCTTTGATGCTGAATCAGTGGCCTAGCACTGTCACAGGGTTTCCCCCTCTTCCTCCATCATCTTTTTGA 684 0.4678 MEQEGEGGEDTNKKEKQKQLVGDAKAAQVAVAVKCPRCDSMNTKFCYYNNYSLSQPRYFCKACKRYWTHGGALRNVPVGGGSRKPKRAKLAANPSSEATVVGVPAPSSVSSVTPFFQGDVGGFLSSSSLGGSGFNNVGSHHFFDQMMMGGADEQQRFMMNENRAHPLINPDGSMWSTLMTTTTHINNNNSSGASSFASSASDAAAALMLNQWPSTVTGFPPLPPSSF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00324 227 ProSiteProfiles Zinc finger Dof-type profile. 33 87 IPR003851 GO:0003677|GO:0006355
Arst10g00324 227 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 181 IPR045174 GO:0003700|GO:0006355
Arst10g00324 227 ProSitePatterns Zinc finger Dof-type signature. 35 71 IPR003851 GO:0003677|GO:0006355
Arst10g00324 227 Pfam Dof domain, zinc finger 33 87 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00324 Arst-Chr10 2754901 2755931 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00324 35 101 C2C2-Dof Transcription Factor Family AT4G21050 73.134 1.63e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst10g00324 zf-Dof 3.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00324 - - aip:107621958 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00324 10 2754901 2755931 Arst10g00324 10 2754901 2755931 ECH
Arst3g04490 3 120219204 120220247 Arst10g00324 10 2754901 2755931 PCT