Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g00226 ATGGCCCAAGTGCAAGAAAATCATCAAGGGATCAAGCTCTTCGGAGCAACGATCACATTGGACGGTGGAGATTCAAAGGAGGGAAATAAGAAAGAAGAAGATCAAACGGTGGAGAAGAAGCCAGATAAGATCATAGCGTGTCCAAGGTGCAAGAGCATGGAAACCAAGTTCTGTTACTTCAACAACTACAACGTTAACCAACCAAGGCACTTCTGCAAGGGATGCCAGAGGTACTGGACCGCCGGCGGTGCTCTCCGAAACGTCCCCGTTGGCGCCGGTCGCCGTAAGGCCAACAAGCTGCCCTGCCGCGCCGCCGTTTCCGATGGTGCTTGCTTATACGATGAAACTTCCGATGATGTCCACAAGTTTGGGTTGGAGGAAGGGTTGCTTTTGGATAAGTGGAATGATGTTGCCGTCCCTCACGGTGATTTCCGGCAGCTTTTTCCGGCCAAGCGCCGGAGGTCCGCCTCAGCTCCGCATCAAGGTCAATGA 492 0.5285 MAQVQENHQGIKLFGATITLDGGDSKEGNKKEEDQTVEKKPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKANKLPCRAAVSDGACLYDETSDDVHKFGLEEGLLLDKWNDVAVPHGDFRQLFPAKRRRSASAPHQGQ 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g00226 163 ProSitePatterns Zinc finger Dof-type signature. 47 83 IPR003851 GO:0003677|GO:0006355
Arst10g00226 163 ProSiteProfiles Zinc finger Dof-type profile. 45 99 IPR003851 GO:0003677|GO:0006355
Arst10g00226 163 Pfam Dof domain, zinc finger 43 99 IPR003851 GO:0003677|GO:0006355
Arst10g00226 163 PANTHER CYCLIC DOF FACTOR 2 29 108 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g00226 Arst-Chr10 2045334 2046995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g00226 6 157 C2C2-Dof Transcription Factor Family AT2G34140 54.762 5.11e-53 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst10g00226 zf-Dof 3.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g00226 - - vra:106779806 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g00226 10 2045334 2046995 Arst10g00226 10 2045334 2046995 ECH