Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2967 ATGATGAAGATCTGCGGAATTGGAGCTGGGTATGTAGGGGGTCCTACAATGGCTGTGATTGCCCTCAAATGTCCCTCAATTGAAGTGGCTGTGGTTGATATCTCTCACTCTCGCATATCAGCTTGGAACAGCAAGAACCTACCCATATATGAGCCAGGCCTAGAAGAAGTGGTGAAGCAGTGTAGAGGAAGGAACCTAATATTCAGCACTGATGTAGAAAAGCATGTGCACGAGGCAGACATAATTTTTGTTTCAGTGAACACTCCAACAAAAACTAGAGGGCTTGGAGCTGGCAAAGCTGCAGACTTGACTTATTGGGAGAGTGCAGCTAGGATGATTGCTGACGTTTCGAAGTCAAACAAGATTGTTGTTGAGAAATCCACTGTCCCAGTCAGAACAGCTGAGGCAATTGAGAAAATTCTAACACACAATAGCAAAGGCATTAGATACCAAATTTTGTCAAATCCTGAGTTTCTTTCTGAGGGAACTGCCATTCAGGACCTTCTAAATCCTGACAGGGTTCTGATTGGAGGGAATGAAGACCCTCAAGGCCAAGAAGCAATTCAAAAGTTGAAGGGTATATATGCCCATTGGGTGCCTCATGACAGAATCGTAACAACCAATCTTTGGTCAGCTGAACTTTCCAAGTTAGCTGACAATGCCTTCTTGGCCCAAAGGATTTCATCTATCAATGCAATGTCAGCTTTATGTGAGGCCACTGGGGCAGAAGTTTCACAAGTTTCTCATGCTCTAAGCAAAAACACCAAACTAGGGCCTAAATACCTTAATGCTAGTGTTGGTTTTGGTGGCTCTTGTTTTCAAAAGGACTTGCTCAACTTGGTTTATATATGTGAGAGTAATGGCCTAATGGAAGTGGCAAATTACTGGAAAGAAGTGATTAAGGTGAATGACTACCAAAAGGGTAGGTTTGTGAACAGGGTTGTGACATCCATGTTCAACACAGTTTCAGGTAAGAAGATTGCAATTTTGGGGTTTGCCTTCAAGAAAGACACCGGTGACACTAGGAAAACTCCTGCAATTGATGTTTGCAAAGGACTTTTGGGAGATAATGCATGTTTGAGCATATATGATCCCAGGGTTACTGAGGAGCAGATTCAAAAAGATTTGTCAATGGATGGTGTTGAATGGGACCATTCCACTACTGTGAAACAGGTTAATGTTGTTGGTGATGCCTATGAGGCAACTAAAGATGCTCATGGTATGTGCATTCTTACTGAGTGGGATGAGTTCAAGATTATTGATTATGAAAAAGTATTTGACAATATGCAGAAACCAGCATTTGTGTTTGATGGTAGAAACATGTTGAATGTTGACAAGTTGAGGGAGATTGGATTCATTGTATACTCAATTGGGAGGCCATTAGACAAGTGGCTGAAGAACATGCCTCAGCATGCATGA 1419 0.4214 MMKICGIGAGYVGGPTMAVIALKCPSIEVAVVDISHSRISAWNSKNLPIYEPGLEEVVKQCRGRNLIFSTDVEKHVHEADIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSNKIVVEKSTVPVRTAEAIEKILTHNSKGIRYQILSNPEFLSEGTAIQDLLNPDRVLIGGNEDPQGQEAIQKLKGIYAHWVPHDRIVTTNLWSAELSKLADNAFLAQRISSINAMSALCEATGAEVSQVSHALSKNTKLGPKYLNASVGFGGSCFQKDLLNLVYICESNGLMEVANYWKEVIKVNDYQKGRFVNRVVTSMFNTVSGKKIAILGFAFKKDTGDTRKTPAIDVCKGLLGDNACLSIYDPRVTEEQIQKDLSMDGVEWDHSTTVKQVNVVGDAYEATKDAHGMCILTEWDEFKIIDYEKVFDNMQKPAFVFDGRNMLNVDKLREIGFIVYSIGRPLDKWLKNMPQHA* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2967 472 Gene3D - 209 240 - -
Apr9g2967 472 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Apr9g2967 472 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2 185 IPR001732 GO:0016616|GO:0051287
Apr9g2967 472 Gene3D - 1 208 - -
Apr9g2967 472 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 201 IPR036291 -
Apr9g2967 472 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 470 IPR028356 GO:0003979
Apr9g2967 472 Gene3D - 241 471 - -
Apr9g2967 472 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 455 IPR036220 -
Apr9g2967 472 SMART UDPG_MGDP_dh_C_a_2_a 328 444 IPR014027 GO:0016616|GO:0051287
Apr9g2967 472 PIRSF UDPglc_DH_euk 1 471 IPR028356 GO:0003979
Apr9g2967 472 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 3 1 470 - -
Apr9g2967 472 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 309 IPR008927 -
Apr9g2967 472 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 2 440 IPR017476 GO:0016616
Apr9g2967 472 PIRSF UDPglc_GDPman_dh 2 459 IPR017476 GO:0016616
Apr9g2967 472 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 443 IPR014027 GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2967 Apr-Chr9 36547382 36548800 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0247 6 2569886 2572738 Apr9g2967 9 36547382 36548800 ECH
Apr9g2967 9 36547382 36548800 Apr9g2967 9 36547382 36548800 ECH