Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g2421 ATGGGCACCCCTGACAAGAAAATATCTGACCTTGTTGATGTAGTTAGGTCTTGGATCCCTCGAAGGGCTGAGCCACCAAATGTGTCGAGGGACTTCTGGATGCCCGATCACAGTTGTAGGGTATGCTATGAGTGTGATTCACAGTTCACAATATTCAACCGCAGGCATCACTGTCGAATCTGTGGTCGAGTTTTCTGTGCAAAATGCACTGCCAATTCTGTTCCTGCGCCATCAGATGAGCCAAATGCTGGTCGTGAAGACTGGGAGAGGATTAGGGTCTGTAATTACTGCTTTAAAACATGGGAACAAGGTTTAGCAACGGTTGACAATGGCACTCTTTCAGCCACCCCTTGTCTCAGCCCTTCACCATCTACTACAAGCTTGGTCAGCACTAAGTCCAGTTGCACTTGTAATAGTAGTGGCAGCACTGCTGGTTCAGTTCCGTACTCAACTGGGTCTTACCAGCGTGTGCCTTATAGTCCACGTCAATCTTCCCAAATGAATCAAATAACAGATGAGCAAGAAAATTTAAATTCTACAGGGAGCACAAATCCGTCTGCTGCTGTAGGGAACTTGGCTTCTAACCAATTTGGCTATTGCTTCAACAGGAGTGATGATGAGGATGATGATTATGGTGTTTATCATTCTGATACAGAATCAAGGCATTACTCTCATGCCCATGACTATGATGATACAGTTAACGTTCATGGGGTTGATCATGTCTACGGACCACATCAAATTCATCCTGATGGAGATAACATTCAGGAAAAAGGCTTGAGTTCCCTAACGGCTCCACATGATCTTGATCTAGAAGGGGTAGGGGTAGGTGGAATTCAAACACCTGGAAAAGAAGCAGATGGGCATGATCACACTGATGAATGTGAAACTTGTCCTTATCATGAGGAGAGTAATAATGCAGAGCCTGTGGATTTTGAGAATAATGGGCTACTGTGGCTACCTCCTGAGCCAGAAGATGAAGAGGATGATAGAGAAGCTGTTCTTTTTGAGGATGATGAAGATGAGGGTACTACTGGAGAATGGGGATATTTACGATCCTCCAATAGTTTTGGCTCTGGAGAATGTCGTAGCAGAGATAAATCAAGTGAGGATCACAGGAAGGCCATGAAGAATGTTGTGGAAGGGCATTTTAGAGCTCTGGTAGCTCAGCTTTTACAGGTGGAAAACCTAACTATTTGTGATGAAAATGGAAAAGAGAGTTGGTTGGATATAATTACTGCTTTGTCTTGGGAAGCTGCTACACTTCTGAAGCCTGATATGAGCAGAGGTGGAGGTATGGATCCTGGTGGATATGTAAAGGTTAAATGCATAGCTTGTGGGCATCGAAGTGAAAGCATGGTGATTAAAGGAGTTGTGTGTAAAAAGAATGTGGCTCATCGGCGAATGACATCAAAAATTGATAAACCACGTTTTCTAATACTCGGAGGTGCTTTGGAGTATCAGCGTGTTTCTAACCAGTTATCAAGCGTTGATACTTTATTACAGCAGGAGATGGACCATTTGAAGATGGCAGTTGCAAGGATTGATGCTCATCATCCCAATGTTCTTTTGGTAGAGAAGTCAGTATCTCGTTATGCTCAAGAATACCTTCTTGCTAAAGACATATCACTTGTTCTGAATATTAAAAAGCCACTTTTAGAGCGCATTGCCCGTTGTACTGGGGCACAGATTGTCCCCTCAATTGATCATCTGACCTCTCAGAAGCTGGGGTACTGTGAAACATTCCACGTGGACAAATTTTTTGAGGAGCATGGTAGTGCTGGGCAAGGTGGGAAAAAATCAACAAAGACTTTGATGTTCTTTGAGGGTTGTCCAAAACCTTTGGGTTGCACTATCTTGCTGAAAGGTGCCAACGGGGATGAGTTGAAGAAGTTGAAACATGTGGTTCAATATGGGGTTTTTGCAGCCTATCATTTGGCACTGGAGACATCTTTCCTGGCTGATGAAGGTGCTTCACCGCTAGAGTTTCCCTTGACATCTCCCATAACCGTTGCATTACCTGATAAACCATCTAGTATTGTGAGATCCATTTCCACTATACCTGGATTTTCTGTTCTCTCTGCTAGAGAGCATCAAGGAGCTAAACCTTTTAAAGAAGTACCAAAATCTAATGATTCCCACAAGGTAGAAAGAACCCCATCTAGCTGCAGTGTGTCCACTGAAAGATCACTGGGGGGTAACTCAATCCATATGCTTGAATTGTCTGGAAATGTCACCCAATCAGCTCGGGATATGCCATCTTCCCACTGCAATAGTTTCCTCTCAAGTACTGTTTCTAAAGAGGATGATGAGAGAAGGGAAACTATGCTGCATGATGATCTTCTTTCAAATTCTTTTGGTGCCTTCGAGCCTTCACGGCAAGATGATGATAACCACATCAGAGCTGCAGCATTGTCTGCTAACCAAGGAGCTAATCCTGAGATACTTTATTTAAAACACGATAATAATTATAATAATGATCATGATGACATTATACATTCAAAAGAAGATTTTCTTCCCTCAACTTCTGACCATCAGAGTATTTTGGTCTTTTTATCAACACGATGTGTGTGGAAAGGAACTGTTTGTGAAAGGTCTCACCTTGTGAGAATTAAATACTATGGAAGTTCTGATAAGCCTTTGGGACGGTTTTTGAGAGATCAACTACTTGATCAGAGTTACACTTGCTGCTCATGTGAAATGCCATCAGAAGCTCATGTTCATTGTTATACTCACCGGCAAGGGAGCTTGACAATTTCTGTCAAGAAACTATCAGAGTTTCCTTTACCAGGGGAACGGGAAGGTAAAATATGGATGTGGCACAGATGCCTGAAATGTCCCCGTGTAAATGGTTTTCCTCCTGCTACACGGAGAGTAGTTATGTCTGATGCTGCTTGGGGCTTATCCTTTGGGAAATTTTTGGAGCTCAGTTTTTCAAATCATGCGGCAGCAAGCAGGGTTGCAAGTTGTGGTCATTCTCTCCACAGAGATTGTTTAAGATTCTATGGTTTTGGGAAGATGGTTGCCTGCTTTCGTTATGCTTCAATTGACCTTCATTCTGTTTATCTTCCACCACCTAAACTTGAATTCAACTATGATAGTCAGGACTGGCTACAAAAAGAAGCAAATGAGCTGCATAACAAGGCCAAAGTACTATTTAGTGAAGTGTGCAACACTATGCATCAAATTTCAGAGAAGGTTTCAGGTCTTGTGTTGCAGGAGGGTGGAAATAAGGTGTCAAATTTTAGGAATTTAGTCACTGAACTTAAAGGGATTCTGCAGTTTGAGAAAGAGGAATTTGAGGACTCCTTACATAAGTTGCTGCATAAAGAGGGCAAAACTGGTCAGCCTGTGGTTGATATTCTAGAGCTCAATAAGTTGCGCCGGAATATCCTTATCTATTCTTATGTTTGGGATCAGCGCTTGACATATGCATCCAACCTTAGTAAAATTACTCTTCAAGAAAATTCAAAGAACTTAAATCATAGGGAGAAGTTGCTTGGTTCTAGGGAAAATGTTATTGAGGCAGATGTCTCCTCTAGGCCAGCAAAAGGCCATGCCAGTTGTGATTCCTTTCTTTCGGAAACAAAACCCAATGGAAGCCTAAATTTTGAAAACACTAACCTCCCTGGTGAAGTAATTAAAAGTGAGGACAAGAGTAAAGACACAAATCATGATAAAGTTGATCTCTCCCTCTCTGGTGGTTCAAATATCAATGATAAATCTGATTCTCTGGAGTTTGGAGGTACTGTACGGAGGGCTTTATCAGAGGGGGGATCTCCTGTTGTGGCTAATTTATCAGATACCCTTGATGCAGCATGGACAGGTGAAAATCACCCTATAAATTCATCACTTAAAGAAAATGGTTGTCTACCTCATGATGCATCAGCTGTGGCAGTTCATTCACCTGTGGCCAATATAGTCACCTCAAAATCAAATTCTGATAATTATACTGTCCATATAGGTGGAATGGAGGCAGGATGCACTAATGACTCTAAAGTGTTCTCCAAAGGACTTGATACTAAATGGAAAGGAATGCCTTTTGCAAACTTCTTTGGTTCCTTCAACAAAACTTCTTCCTTCAATACACAGAAGCTTATTGAGTACAACCCAGTCCACATTTTATCGTTTCGAGAGTTGGAGCACCAGACTGGTGCTAGACTGCTTCTGCCAGCTGGTATTAATGATACCATAGTGCCTGTCTATGATGATGAACCCACCAGTGTAATAGCATATGTTCTTGTGTCAATGGAATATCATATCCAGATGTCGGAATCTGATAGACTTAAAGACAGTGGAGACAGTTCAATTTCATTGCCACTCTTTGATTCAACAAGTCTACTTTCACTTAACTCCTTTGATGAGACAATTACCAATACCTTCAGAAGTCTTGGATCTTCTGATGAGAACATGTTGTCCACTTCTGGGTCTCGTAGTTTACCAGCTGGAGATCCACTCTCATTCACAAAGGATTTGCATGCAAGGGTTTCTTTTACTGATGATAGCTCCCTTGGAAAAGTGAAATATACTGTAACTTGCTACTATGCAAAGAGATTTGAGGCTTTAAGAAGAACTTGTTGCCCTTCTGAGTTAGATTTTGTGCGGTCCCTTAGTCGTTGTAAGAAGTGGGGGGCTCAGGGAGGAAAGAGCAATGTCTTCTTTGCAAAAACCTTGGATGATAGATTTATTATCAAGCAGGTTACAAAAACAGAACTTGAGTCATTTATCAAGTTTGCACCAGCTTATTTTAAGTATTTATCTGAGTCAATCAGTACTGGAAGCCCAACTTGTCTTGCAAAGATCTTGGGCATATATCAGGTAACATCAAAGCACCTCAAAGGAGGGAAGGAAACAAAAATGGATGTTTTGGTTATGGAAAATCTTCTTTATAGGCGTAACATTAGACGGCTCTATGACCTCAAAGGTTCTTCTCGATCACGGTACAATCCAGATACAAGTGGGAGCAATAAAGTTCTGCTGGATCAGAATCTCATTGAAGCTATGCCAACCTCTCCAATATTTGTTGGGAACAAGGCAAAACGGTTGCTTGAGAGGGCTGTGTGGAATGATACTGCATTCCTTGCATCAATATATGTGATGGACTACTCATTACTGGTTGGCGTGGACGAGGAAAAACATGAACTGGTTTTAGGTATCATTGATTTTATGAGGCAATATACATGGGATAAACACCTTGAAACTTGGGTGAAGACCTCTGGCATCCTTGGTGGACCAAAGAATACTTCTCCAACTGTTATATCCCCACAGCAGTACAAGAAAAGGTTCAGGAAAGCCATGAGTTTGTATTTTCTTATGGTGCCAGATCAATGGTCTCCTCCAGAATTACACCCCAGTGGTTCCCAATCAGATTTTTGTGATGAAAATTCATGA 5388 0.417 MGTPDKKISDLVDVVRSWIPRRAEPPNVSRDFWMPDHSCRVCYECDSQFTIFNRRHHCRICGRVFCAKCTANSVPAPSDEPNAGREDWERIRVCNYCFKTWEQGLATVDNGTLSATPCLSPSPSTTSLVSTKSSCTCNSSGSTAGSVPYSTGSYQRVPYSPRQSSQMNQITDEQENLNSTGSTNPSAAVGNLASNQFGYCFNRSDDEDDDYGVYHSDTESRHYSHAHDYDDTVNVHGVDHVYGPHQIHPDGDNIQEKGLSSLTAPHDLDLEGVGVGGIQTPGKEADGHDHTDECETCPYHEESNNAEPVDFENNGLLWLPPEPEDEEDDREAVLFEDDEDEGTTGEWGYLRSSNSFGSGECRSRDKSSEDHRKAMKNVVEGHFRALVAQLLQVENLTICDENGKESWLDIITALSWEAATLLKPDMSRGGGMDPGGYVKVKCIACGHRSESMVIKGVVCKKNVAHRRMTSKIDKPRFLILGGALEYQRVSNQLSSVDTLLQQEMDHLKMAVARIDAHHPNVLLVEKSVSRYAQEYLLAKDISLVLNIKKPLLERIARCTGAQIVPSIDHLTSQKLGYCETFHVDKFFEEHGSAGQGGKKSTKTLMFFEGCPKPLGCTILLKGANGDELKKLKHVVQYGVFAAYHLALETSFLADEGASPLEFPLTSPITVALPDKPSSIVRSISTIPGFSVLSAREHQGAKPFKEVPKSNDSHKVERTPSSCSVSTERSLGGNSIHMLELSGNVTQSARDMPSSHCNSFLSSTVSKEDDERRETMLHDDLLSNSFGAFEPSRQDDDNHIRAAALSANQGANPEILYLKHDNNYNNDHDDIIHSKEDFLPSTSDHQSILVFLSTRCVWKGTVCERSHLVRIKYYGSSDKPLGRFLRDQLLDQSYTCCSCEMPSEAHVHCYTHRQGSLTISVKKLSEFPLPGEREGKIWMWHRCLKCPRVNGFPPATRRVVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVACFRYASIDLHSVYLPPPKLEFNYDSQDWLQKEANELHNKAKVLFSEVCNTMHQISEKVSGLVLQEGGNKVSNFRNLVTELKGILQFEKEEFEDSLHKLLHKEGKTGQPVVDILELNKLRRNILIYSYVWDQRLTYASNLSKITLQENSKNLNHREKLLGSRENVIEADVSSRPAKGHASCDSFLSETKPNGSLNFENTNLPGEVIKSEDKSKDTNHDKVDLSLSGGSNINDKSDSLEFGGTVRRALSEGGSPVVANLSDTLDAAWTGENHPINSSLKENGCLPHDASAVAVHSPVANIVTSKSNSDNYTVHIGGMEAGCTNDSKVFSKGLDTKWKGMPFANFFGSFNKTSSFNTQKLIEYNPVHILSFRELEHQTGARLLLPAGINDTIVPVYDDEPTSVIAYVLVSMEYHIQMSESDRLKDSGDSSISLPLFDSTSLLSLNSFDETITNTFRSLGSSDENMLSTSGSRSLPAGDPLSFTKDLHARVSFTDDSSLGKVKYTVTCYYAKRFEALRRTCCPSELDFVRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAPAYFKYLSESISTGSPTCLAKILGIYQVTSKHLKGGKETKMDVLVMENLLYRRNIRRLYDLKGSSRSRYNPDTSGSNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIYVMDYSLLVGVDEEKHELVLGIIDFMRQYTWDKHLETWVKTSGILGGPKNTSPTVISPQQYKKRFRKAMSLYFLMVPDQWSPPELHPSGSQSDFCDENS* 1796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g2421 1795 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1545 1711 IPR002498 GO:0016307|GO:0046488
Apr9g2421 1795 MobiDBLite consensus disorder prediction 1199 1240 - -
Apr9g2421 1795 MobiDBLite consensus disorder prediction 137 188 - -
Apr9g2421 1795 Gene3D - 1628 1770 - -
Apr9g2421 1795 MobiDBLite consensus disorder prediction 700 729 - -
Apr9g2421 1795 CDD Fab1_TCP 384 656 - -
Apr9g2421 1795 SMART fyve_4 28 103 IPR000306 GO:0046872
Apr9g2421 1795 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Apr9g2421 1795 SUPERFAMILY SAICAR synthase-like 1504 1769 - -
Apr9g2421 1795 Pfam TCP-1/cpn60 chaperonin family 403 650 IPR002423 GO:0005524
Apr9g2421 1795 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 1789 - -
Apr9g2421 1795 MobiDBLite consensus disorder prediction 336 369 - -
Apr9g2421 1795 MobiDBLite consensus disorder prediction 1211 1227 - -
Apr9g2421 1795 SMART PIPK_2 1479 1770 IPR002498 GO:0016307|GO:0046488
Apr9g2421 1795 CDD FYVE_PIKfyve_Fab1 32 99 - -
Apr9g2421 1795 MobiDBLite consensus disorder prediction 347 361 - -
Apr9g2421 1795 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1468 1626 IPR027484 -
Apr9g2421 1795 SUPERFAMILY GroEL apical domain-like 450 622 IPR027409 -
Apr9g2421 1795 CDD PIPKc_PIKfyve 1506 1769 IPR044769 GO:0000285
Apr9g2421 1795 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 1 1789 - -
Apr9g2421 1795 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1444 1769 IPR002498 GO:0016307|GO:0046488
Apr9g2421 1795 SUPERFAMILY FYVE/PHD zinc finger 31 105 IPR011011 -
Apr9g2421 1795 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 108 IPR013083 -
Apr9g2421 1795 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Apr9g2421 1795 MobiDBLite consensus disorder prediction 700 715 - -
Apr9g2421 1795 Gene3D GroEL 449 622 IPR027409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g2421 Apr-Chr9 31622410 31634317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g2421 1 1795 EF-hand Containing Proteins AT3G14270 57.866 0.0 1957
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g2421 9 31622410 31634317 Apr9g2421 9 31622410 31634317 ECH
Apr9g2421 9 31622410 31634317 Apr3g1621 3 31639355 31647381 PCT