Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1888 ATGGACCCGGTTTGCGGATTTTTGTCTGCTATTTCAAGAGATTTGGTGTGCTTAGTAGTGAATCAACTACGTTATCCTTGTTGCTTCAACAAATTTGTTGCTGAACTTGAAAAAGAAGAAGGCAATTTGATTGCCACAAGAAATACCGTCCAAAACGGTGTTGCACGAGCCGAGAAAGAAGCGAGAAAGCCTACCGAAGTCGTTGAAAAGTGGCTGAGTGATGCTAACAATGACGCAGACAAAGTGAATCAATTGCTAACAGAAGCAAGAACCAAAAAGACTTGCTGTTTTGGGCTTTCTTCAGATTGGATTTGGAGATACCAGTTAGGAAAGAAGTTAGCAAACAAAAAGGAAGAGCTTAAAGAATTCATTCAAGAAGGTAAAAGATATGCACCACTTGAACGCATTGCCACACTTCCTTCCAGTACGCTTGGTTTTCTCTCAGAAAATTGTTTGAATTTTGAGAGTAGAAAATCTGCTAATGAACAGTTGATGGAAGCACTGAAAGATGATCAGGTTGGCATCATTGGATTGTTTGGGATGGGTGGTTGTGGTAAAACCACTTTGGCAATGGAATTTGGGAGGATATCAGAAGCAGAACATCTCTTTGACAAAGTGCTTTTTGTGCCTGTCTCTAAGACGGTGGAAGTTCTAAGGATCCAAGAAAAAATTGCAAGCTCACTTCAGTTTACATTTCCAGAAAATGAAGAAATTGAGAGAGCTCAACGCTTATTCCATAGATTAAAACAAGAAAAAAGGATTCTTGTGATTCTAGATGATGTGTGGCAGAGGCTTAATTTTAGAGCCATAGGGATTCCCTCTCATGAAGATCATAAAGGTTGTAAGGTTCTCATCACCACTCGATCTGAAAATGTTTGTCAAGGAATTAATTGTCAAAGAACGGTTTCATTACAAATATTGAGCAATGACGAAGGGTGGATTCTTTTCCAACAGCAAGCAAATATATGTGACGAAGCTTCCATTCCCCTGAAATTGGCAAGAGACATTTCAGATGAATGCAAAGGATTGCCTGTTGCCATTGCAGCTGTGGCTGGCTCTTTGAAAGGCAAGGCTGAAGCTGATTGGAAGGTAGCTTTGAATAGATTAAGAAGTTCGATACCAGTGAACATAGAAGAAGGTTTGCAAGATCCTTACAAGTGCCTCCAATTAAGCTATGATTATTTGAACACGGAAGAAACCAAGTCACTTCTATTGTTGTGTTCTGCATATCCCGAAGATTATGAAATACCAGTTGAAGAATTAACCAGATATGCTATAGGTCTAGGCTTAGGTGGAGAAGTTGGCTCATATGATGCAAAAAGGAATGAGGTAACTGCAGCTAAAAATAAGCTCATAAGTTCTTCTTTGTTGATAGCTGTTGAACCAGGGAATCATGTCAAAATGCATGACCTAGTTCGCGACGTAGCCCAATGGATTGCGAAGCATGGGAATAAAGATGTGAATGAATACAGTCCACCAAGATACCTATGGTGTGAGGAATTTCCAAATGAACTTGACTGTTCCAATCTTGAATTTATAAGGACACAAACAAACGTGGAAGCATTGGATGAAATATTCAGAAGAATGAGAAAGCTCAAAGTTTTGATTCTAGAGAGTGAGTGGTCCGGGGAGCCATTGTCGATGATGTTACTCAAATCGCTGACAAATCTTCATTATCTAGCCCTTCAAAACTGGAAATTAAGCGACATCTCAATTGCAGAAGATAAATGGAATCTTGAAGGTCTTGCATTGATTAGATGTTCATTCCCTATATTATTAGACGATGTTTTATCTAAAGAATTGACAAACTTGAAATTGTTAATGATAAAAAATTGTACCATGGAATGGAGTACTTTTGAAGTGATCCTAAGACTACCACAACTGGAAGAATTGTACATCGTCCACCGTGGAATAAGAAGTGTTGTTTGCTCTGAAAACTTTGACAAGTTCATTGTTCCACAGAGACTGCAACGGTATGACATCCAATTTGGAGGAGGATATTCGAGTGCTATTCCCACTCATGACCGAGCTTTGTGGGTTGATGAGTTTCCCATGTTAAATGAAATTATCAAGGGCTTTGCCAGAAAAGCAGAGACTTTGCAACTGTGTTCTATGATGGGATGTGAGAAAAATATTATCCCTGACATATTTGGAACAGAAAGAGGAAGCATGAATGAGTTGAAAGGGCTTGCAGTGTATTATTGTAAGAAAATAGAGTGCTTGGTTGAAAACGACAAGCCGGAGATAGGAAATGTCTTTTCCAATCTGATTCACTTACAAGTTGAAGGTATGGAGCAGCTAAGAACTTTATGGCACGGTCATTTGCCTCTCAGCGGGCCTTTCGAAAAATTAGAGAGTCTGGATATACATAGATGTCCAAAACTAACTTCTCTGTTTGCTCTAAATGAGCCTCCTCTGCAATTCCATTTCTTCCAAAATCTTCAAAAAGTTAGTGTAATATCTTGTGTAGAATTGAAATACTTATTCCAAACCTGCGTGGAAGGAGACTTATCTGAATTGAAAGAGTCAGAGACGACTTATTGCAGTCAACAAGATGAAATCATGGAGGATGAGAAGCTTCAACTTTTTCCAAATCCTCGTTTGGAATGTAATCAATTTCAAAATTTCCGAGCGAGTACTCTTATTCCATCAACATCATCCTTTGTCAACCCCCGAGGATTATTCTCTTTGTCCAATCTTAGATCGCTCTGTTTACTCAAATGTCTGAAGTTGGGCTCCTTATTTACATCATCCATTGCTAAAACCTTGATATCATTAGAAAGGTTGGAATTAGTTGGATGTAATGAATTGAAAAACTTAATAGACATTGACCATGACCAGAACAATTGGAATGCTGTCTTCCCAAAATTAAAAGAGCTGACTGTAATCTCCTGTGACCATCTGGAATACTTGCTTGGCCCATATCATCAGAAGATTCATATTCTTCTCCCATCATTGGAAATCATCCATCTTCAGTATTTACCGAAATTTATCAGATTAAACTCTTTGTTACAGTCATCGTCGAGAGATAGTTATGTGGATTCTAAGAATTCTTTCATTCTCCAAAATCTTAAAAAAGTGGAGATAGTGAAATGTGAAAAATTGGAAGCAATCTTTCCTGCATCTTGTTTGAGATACCTACCAGAGTTGGAGGTTCTGTGTATAATAAATTGCAACGAATTAAAGCATATCATTGAAGAGAACACAGAGAATCATAATTTGTCAAATTTTCTAGCGTCACAGCCATGCTTCCCAAAACTAAAAATGCTGATTATTGAAAATTGCTACAAGTTGAAACGTTTCATCTCTGCATCTAAATGTGATCTTCCCAAACTACAGGTTTTAATCATCAGGGAAGCCTCTGAGTTAGAAGAACTAATCGGAGAAGGTAACGTGATAGGGAATGTGAAACTTGAGCTTCCAATGCTGAAGGCTTTAATATTTTGGAAATTGACAAAATTTTGCCAAGAGATTGAATCACATGTTGAGGTGGATCGTGTTGTCCATGATTGTCCAAATCTCTCGTTGACTTCAACTGCCATTCTTGAAGAGCTTTTGCCAAAAATAGAAGATGATGTAGAAAGAGAGTTTGATCTCCCATACGAGATACAGGAGGAGTTTGCTCAAACAAGTTTATGGCGTGAGGAGTCTACAACGGGAGACACTGAAAATCCGGGCGAAGCCACTGTAGATTCTTCAGATGACCCTAAATCTCGAAGAGCTTCAGGAAGTGGGTCGCCTTCTTCACGCGTGAGTTATGCGAGCTGA 3768 0.3869 MDPVCGFLSAISRDLVCLVVNQLRYPCCFNKFVAELEKEEGNLIATRNTVQNGVARAEKEARKPTEVVEKWLSDANNDADKVNQLLTEARTKKTCCFGLSSDWIWRYQLGKKLANKKEELKEFIQEGKRYAPLERIATLPSSTLGFLSENCLNFESRKSANEQLMEALKDDQVGIIGLFGMGGCGKTTLAMEFGRISEAEHLFDKVLFVPVSKTVEVLRIQEKIASSLQFTFPENEEIERAQRLFHRLKQEKRILVILDDVWQRLNFRAIGIPSHEDHKGCKVLITTRSENVCQGINCQRTVSLQILSNDEGWILFQQQANICDEASIPLKLARDISDECKGLPVAIAAVAGSLKGKAEADWKVALNRLRSSIPVNIEEGLQDPYKCLQLSYDYLNTEETKSLLLLCSAYPEDYEIPVEELTRYAIGLGLGGEVGSYDAKRNEVTAAKNKLISSSLLIAVEPGNHVKMHDLVRDVAQWIAKHGNKDVNEYSPPRYLWCEEFPNELDCSNLEFIRTQTNVEALDEIFRRMRKLKVLILESEWSGEPLSMMLLKSLTNLHYLALQNWKLSDISIAEDKWNLEGLALIRCSFPILLDDVLSKELTNLKLLMIKNCTMEWSTFEVILRLPQLEELYIVHRGIRSVVCSENFDKFIVPQRLQRYDIQFGGGYSSAIPTHDRALWVDEFPMLNEIIKGFARKAETLQLCSMMGCEKNIIPDIFGTERGSMNELKGLAVYYCKKIECLVENDKPEIGNVFSNLIHLQVEGMEQLRTLWHGHLPLSGPFEKLESLDIHRCPKLTSLFALNEPPLQFHFFQNLQKVSVISCVELKYLFQTCVEGDLSELKESETTYCSQQDEIMEDEKLQLFPNPRLECNQFQNFRASTLIPSTSSFVNPRGLFSLSNLRSLCLLKCLKLGSLFTSSIAKTLISLERLELVGCNELKNLIDIDHDQNNWNAVFPKLKELTVISCDHLEYLLGPYHQKIHILLPSLEIIHLQYLPKFIRLNSLLQSSSRDSYVDSKNSFILQNLKKVEIVKCEKLEAIFPASCLRYLPELEVLCIINCNELKHIIEENTENHNLSNFLASQPCFPKLKMLIIENCYKLKRFISASKCDLPKLQVLIIREASELEELIGEGNVIGNVKLELPMLKALIFWKLTKFCQEIESHVEVDRVVHDCPNLSLTSTAILEELLPKIEDDVEREFDLPYEIQEEFAQTSLWREESTTGDTENPGEATVDSSDDPKSRRASGSGSPSSRVSYAS* 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1888 1255 Pfam NB-ARC domain 161 393 IPR002182 GO:0043531
Apr9g1888 1255 Gene3D - 391 478 IPR036388 -
Apr9g1888 1255 Coils Coil 72 92 - -
Apr9g1888 1255 MobiDBLite consensus disorder prediction 1210 1229 - -
Apr9g1888 1255 Gene3D Ribonuclease Inhibitor 482 822 IPR032675 -
Apr9g1888 1255 SUPERFAMILY RNI-like 760 1120 - -
Apr9g1888 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 407 IPR027417 -
Apr9g1888 1255 SUPERFAMILY L domain-like 467 854 - -
Apr9g1888 1255 MobiDBLite consensus disorder prediction 1209 1255 - -
Apr9g1888 1255 Gene3D Ribonuclease Inhibitor 835 1017 IPR032675 -
Apr9g1888 1255 Gene3D Ribonuclease Inhibitor 1018 1144 IPR032675 -
Apr9g1888 1255 Gene3D - 144 303 IPR027417 -
Apr9g1888 1255 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 895 1081 - -
Apr9g1888 1255 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 23 633 - -
Apr9g1888 1255 CDD AAA 157 287 - -
Apr9g1888 1255 Gene3D - 307 390 IPR042197 -
Apr9g1888 1255 PRINTS Disease resistance protein signature 175 190 - -
Apr9g1888 1255 PRINTS Disease resistance protein signature 248 262 - -
Apr9g1888 1255 PRINTS Disease resistance protein signature 340 354 - -
Apr9g1888 1255 PRINTS Disease resistance protein signature 921 937 - -
Apr9g1888 1255 PANTHER - 23 633 - -
Apr9g1888 1255 PANTHER - 895 1081 - -
Apr9g1888 1255 MobiDBLite consensus disorder prediction 1239 1255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1888 Apr-Chr9 27520960 27530222 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1888 9 27520960 27530222 Apr9g1888 9 27520960 27530222 ECH