Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g1886 AAATTGATGGACTTGCTTTTGGGATTTTTGTCTTCTATTTCAAGAGATTTGGCGTGCGGAGTAGTGAATCAACTACGTTATCCTTGTTGTTTCAACAAATTTGTTGATGAACTTGAAAAAGAAGAAGGCAATTTGATTGCCACAAGAAATACTGTACAAGACCGTGGTGCACATGCCCAGAAACAAGCGAGAAAGTCTACTGAAGTTGTTGAAAAGTGGCTGAATGATGCTAACATTGATGTAGAAAAAGTGAATCAACTGCTAACAGAGGCAAGAACCAAAAAGACTTGGTGTTTTGGGCTTTGTTCAAATTGGATTTGGCGATACCAATTAGGAAAGAAGTTAGCAAGTAAAAATGAGGAGCTTAAAGAATGCACTGAAAAAGGTAGACAATATATACAAATTGAACGCATTGCTACACTTCCTTCCACTAAGCTTGGTTTTCTCTCAGAAAATTGTTTGAATTTTGCAAGTAGAAAATCTGCTAATGAACAGCTGATGGAGGCAGTGAAAGATGATCAGGTTGGCATGATTGGATTGTTTGGGATGGGTGGTTGTGGTAAAACCACGTTGGCAATGGAAGTTGGGAGGGTAGCAGAGGCAGAACATCTCTTTGACAAAGTTCTTTTTGTACCTGTCTCTAAAACGGTAGAAGTTCAAAGGATCCAAGAAAAAATTGCAAGCTCACTTCAGTATTCAGAAAACGAAGAAATTGAGAGAGCCCAACGCTTATTCCATAGAATAAGACATGAAAAAAGGATTCTGGTGATTCTAGATGATGTGTGGCAGAGGCTTAATTTTAGAGCCATAGGGATTCCCCCTCATGAAGATCATAAAGGTTGTAAGGTTCTCATCACCACTCGATATGGAAATGTTTGTCAAGGAATGAATTGTCAAAGAACGGTTCAATTACAAATACTGAGCAATGACGAAGGGTGGATTCTTTTCCAACAGCAAGCAAATATATGTGAGGAAGCTTCCAGTCCCTTGAAATTGGCAAGAGACATTTCAGATGAATGCAAAGGATTGCCTGTTGCCATTGCAGCTGTGGCTGGCTCTTTGAAAGGCAAAGCTGAAGCTGATTGGAAGGCAGCTTTGAATAGATTGAGAAGTTCGATACCAGTGAACATTGAAGAAGGTTTGCAAGATCCTTACAAGTGCCTCCAATTAAGCTATGACTATTTGGACACCGAAGAAACCAAGTCTCTTTTGTTGTTGTGTTCTGCATACGCCGAAGATTATGAAATACCAGTTGAAGAATTAACCAGATATGCTGTAGGTCTAGGCTTAGGTGGAGAAGTTGGCTCATACGATGCAAAAAGAAATGAGGTAACTGCAGCTAAAAATAAGCTCATAAGTTCTTGTTTGTTGATAGCTGTTGAGCCAGGGAATCGTGTCAAAATCCATGACTTAGTTCGCGACGTAGTCCAATGGATTGCGAAGCATGGGAATAAAGATGTGAATGAATACCCTCCACCAAGATACCTATGGTGTGAGGAATTTCCAAATGAACTTGACTGTTCCAATCTTGAATTTATAAGGACACAAACAAACGTGGAAGCATTGGATGAAATATTCAGAAGAATGAGAAAACTCAAAGTTTTGATTCTAGAAAATGTGGGGTCCCAGAAGCAATTGTCGATGATGTTAGTCAAATCGTTGACAAATCTTCGTTGTCTAGCCCTCGAAGAATGGGAATTAAGCGACATCTCAATTGCAGAAGATAAATGGAATCTTGAAGGTCTTGCATTGATTAGCTGCTCGTTCCAGTTCCCTAAATTATTAGACGGTGTTTTAGCTAAAGAATTGACATATTTGAAATGGTTAGAGATAAAAGATTGTGGCATGGAATGGAGTACTTTTGAAGTGATCATAAGACTACCACAACTGGAAGAATTGTACATCGTCGACAAAGGAATAAGAAGTGTTGTTTACTCTGAAAACTTTGACAAGTTCGTTGTTCCACAGAGACTGCAATGGTTTGGCATCGAATTTGGAATACGATATTTTCCTATAATTTCCACTGATGACCGAGCTTTGTTGGTCAGTGAGTTTCGCATGTCAAATGAAATTATCAAGGGTTTTGCCAGAAAAGCTGAGACTTTGGAACTGTATTTTATGACCGGATGTGAGAAAAATATTATCCCTGACTTATTTGAAACAGAAAGAGGAAGCTCGAACGAGTTGAAAAGGCTTAACATGTTTTATTGTAGGGAGATAAGAACCTTATGGCACGGTCTGTTGCCTTTCAGCGGGCCTTTTGAGAAACTAGAGAGCCTGTGTATAGAGTCATGTCCAAAATTAACTTCTCTGGTTGCTCTAAATGAGGTACAAATGGAAGAATTAGAAATATCAAGATATGGTCAGAGTCAAAATGAATTCGAGCGCCAGCTTCCTCTGCAATTCAATCTCTTCCAAAATCTTCAAGAAGTTACGGTAGAACGTTGCGATGAATTGAAATACTTATTCTCAATCAGCGTGGAAGGAGAGTTATCTGGATTGAAAGAGTCAGAATTAGATGAAATCATGGAGGATGAGAAGCCTCAAGTTTTTCCAAATCCTTATTTGGAATCTAATCAATATCAAAATCTGCGAGCATGTACTTCTATTGCATCAACATCATCCTTTGCCAAGCACCGAGATTTTGACCATGAAGAATTGGGATGCTGTCTTCCCAAAGTTAAAAAAGCTCAGAGTAAACACCTGTCACCAACTGGAATACGTGCTTGGCCCGTATCATCGGAGTATTCATATTCTTCTCCCATCATTGGAAATACGTACTTGAAAGATAGTTATGTTCTAATCATCAGGGAAGCCTCTGAGTTAGAAGAACTAATCGGAGAAGGTGACGTGACAAGGAATGTGAAACTTGAGCTTCCAAAGCTGAATGCTTTGATATTTTGGAAATTGACAAAATTTCGCCAAGAGATTGAATCACATGTTGAGGTGGATCGTGTTGTCCTTAATTGTCCAAATCTCTCGTTGACTTCAAATGCCATTCTTGAAGAACTCTGGTCAAAAATAGAAGATGATGTAGAAAGAGTTTTTGATCTCTCATACGAGATACGGGAGTTGCTTTTTAAAATTAGTTCAGGGCGTGGCGGGTTGAGAACGGGAGACATTATCTTTGAAGATCTGCCGGTAGCCACTGTAGAAGATGACCCTAAATCTCGAAGAGCATCAGGAATTGGGTCGCCTTCTTCACAAACACAGGAGTCGGTTTCTGAAACAAGTTCGGAGACATTGCCTTTGAATATCTGGGAGAAGCCACCGTGTCCAGATGGCCCTATATCTCGAAAAGCATCAGAAAGTGGGTCGCCTTCTTCACAAGTGAGTTATGCCAGCTGA 3348 0.3967 KLMDLLLGFLSSISRDLACGVVNQLRYPCCFNKFVDELEKEEGNLIATRNTVQDRGAHAQKQARKSTEVVEKWLNDANIDVEKVNQLLTEARTKKTWCFGLCSNWIWRYQLGKKLASKNEELKECTEKGRQYIQIERIATLPSTKLGFLSENCLNFASRKSANEQLMEAVKDDQVGMIGLFGMGGCGKTTLAMEVGRVAEAEHLFDKVLFVPVSKTVEVQRIQEKIASSLQYSENEEIERAQRLFHRIRHEKRILVILDDVWQRLNFRAIGIPPHEDHKGCKVLITTRYGNVCQGMNCQRTVQLQILSNDEGWILFQQQANICEEASSPLKLARDISDECKGLPVAIAAVAGSLKGKAEADWKAALNRLRSSIPVNIEEGLQDPYKCLQLSYDYLDTEETKSLLLLCSAYAEDYEIPVEELTRYAVGLGLGGEVGSYDAKRNEVTAAKNKLISSCLLIAVEPGNRVKIHDLVRDVVQWIAKHGNKDVNEYPPPRYLWCEEFPNELDCSNLEFIRTQTNVEALDEIFRRMRKLKVLILENVGSQKQLSMMLVKSLTNLRCLALEEWELSDISIAEDKWNLEGLALISCSFQFPKLLDGVLAKELTYLKWLEIKDCGMEWSTFEVIIRLPQLEELYIVDKGIRSVVYSENFDKFVVPQRLQWFGIEFGIRYFPIISTDDRALLVSEFRMSNEIIKGFARKAETLELYFMTGCEKNIIPDLFETERGSSNELKRLNMFYCREIRTLWHGLLPFSGPFEKLESLCIESCPKLTSLVALNEVQMEELEISRYGQSQNEFERQLPLQFNLFQNLQEVTVERCDELKYLFSISVEGELSGLKESELDEIMEDEKPQVFPNPYLESNQYQNLRACTSIASTSSFAKHRDFDHEELGCCLPKVKKAQSKHLSPTGIRAWPVSSEYSYSSPIIGNTYLKDSYVLIIREASELEELIGEGDVTRNVKLELPKLNALIFWKLTKFRQEIESHVEVDRVVLNCPNLSLTSNAILEELWSKIEDDVERVFDLSYEIRELLFKISSGRGGLRTGDIIFEDLPVATVEDDPKSRRASGIGSPSSQTQESVSETSSETLPLNIWEKPPCPDGPISRKASESGSPSSQVSYAS* 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g1886 1115 Pfam NB-ARC domain 164 393 IPR002182 GO:0043531
Apr9g1886 1115 Gene3D - 307 390 IPR042197 -
Apr9g1886 1115 Gene3D - 146 303 IPR027417 -
Apr9g1886 1115 Gene3D - 391 478 IPR036388 -
Apr9g1886 1115 MobiDBLite consensus disorder prediction 1053 1115 - -
Apr9g1886 1115 PRINTS Disease resistance protein signature 177 192 - -
Apr9g1886 1115 PRINTS Disease resistance protein signature 248 262 - -
Apr9g1886 1115 PRINTS Disease resistance protein signature 340 354 - -
Apr9g1886 1115 PRINTS Disease resistance protein signature 527 543 - -
Apr9g1886 1115 MobiDBLite consensus disorder prediction 1061 1084 - -
Apr9g1886 1115 CDD AAA 159 287 - -
Apr9g1886 1115 MobiDBLite consensus disorder prediction 1101 1115 - -
Apr9g1886 1115 Gene3D Ribonuclease Inhibitor 490 663 IPR032675 -
Apr9g1886 1115 Coils Coil 74 94 - -
Apr9g1886 1115 SUPERFAMILY L domain-like 468 822 - -
Apr9g1886 1115 Gene3D Ribonuclease Inhibitor 670 882 IPR032675 -
Apr9g1886 1115 PANTHER - 25 965 - -
Apr9g1886 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 406 IPR027417 -
Apr9g1886 1115 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 25 965 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g1886 Apr-Chr9 27511601 27516251 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1886 9 27511601 27516251 Apr9g1886 9 27511601 27516251 ECH