Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0670 ATGGGATTGGGGCTCTTTAAGGCATTTTTTTGCTGTGGCAAGTCCCATGAAATTGCCATAGTCTCGTCAGATTCTTCTCCTCAGCATCCCTCGAAACAATCTAGGAAAACCAAACCATTAACAATTCCAGCTCCACCACCTCCTCCTCCCAAACGTACCACCTCTTCACAAATAGGAAAAATTCTTGGGAAACCGTTCGTTAACATAAATCAGATATACGAGATGAAGAAGGAACTGGGAAGAGGCCAGTCTGGTGTTACTTATTTGTGTGTGGAGAAGACCACAGGAAGAGAGTATGCATGCAAATCCATTTCAAGAGGGAAGCTGGTGAGTGAACAAGAAATTGATGATGTTAGAAGAGAGGTTATGATTCTTCAGCATCTTTCAGGGCAACCCAACATAGTGGAATTCAGGGGTGCTTATGAAGATAGGCAGAACGTGCACCTTGTGATGGAGTTGTGCAGTGGTGGTGAACTCTTTGACCGTATCACTAGCCGTGCTGCTGAAAATAGGAACTACTCTGAACGTGAAGCAGCCACTGTAATGAGACAGATTGTGAATGTGGTTCATGTGTGTCATTTCATGGGTGTAATACACAGAGACCTTAAGCCAGAGAATTTCTTGTTTGCCACTAAGGATGAGTATGCCGCAGTCAAAGCTACTGATTTTGGACTCTCCATTTTCATCGACGAAGGTAAAGTGTATAGAGAAATTGTTGGAAGTGCCTACTATGTGGCTCCAGAGGTTCTAAAAAAGAATTATGGAAAGGAGATTGATGTTTGGAGCGCAGGAATCATTTTGTACATACTCTTAAGTGGGGTGCCTCCATTTTGGGCTGAAACCGAGACAGGCATATTTAAGGCTATTTTGGAAGGTAATCTTGATCTTGAAAGCGCACCGTGGCCTTCTATTTCAGCTACGGCAAAAGATTTGATAAGAAAAATGTTGAACTATGACCCTGAGAAGCGCATTACTGCTGCTGAAGCCCTTGAACACCCATGGATGAAGGAGGGCGGTGAAGCATCTGATAAACCTCTAGACAATGCTGTCTTAATTAGGATGAAACAATTCAGTGCAATGAACAAGATGAAGAAACTTGCTTTGAAGGTCATAGCAGAAAACCTTTCAGAGGAGGAAATCAAGGGCTTGAGACAAATGTTCAACAACATGGATACTGATCGCAGTGGCACAATCACGTATGAAGAACTCAAATCTGGATTGACCAAATTGGGATCCAAGCTTAGTGAATTTGAAATAAGGCAGCTGATGGATGCTGCTGATGTTGACAAGAGTGGGACTATTGACTATCAAGAATTCATTACTGCCACTATAAACCGGCATAAACTTGAGAAAGAGGAGCATTTGTTTAAGGCTTTTCAATACTTCGACAAGGATAACAGCGGATATATAACAAGAGATGAGCTTAGACAAGCTTTGACTGAATATCAAATGGCAGATGAAGCGACAATAGATGAAGTTATTAATGATGTTGATACTGATAATGATGGAAAAATCAATTATGAAGAGTTTGTCGCTATGATGAGAAAAGGAATCTTGGATTATGATGAGAAAGAGAAACCACGATAA 1587 0.4134 MGLGLFKAFFCCGKSHEIAIVSSDSSPQHPSKQSRKTKPLTIPAPPPPPPKRTTSSQIGKILGKPFVNINQIYEMKKELGRGQSGVTYLCVEKTTGREYACKSISRGKLVSEQEIDDVRREVMILQHLSGQPNIVEFRGAYEDRQNVHLVMELCSGGELFDRITSRAAENRNYSEREAATVMRQIVNVVHVCHFMGVIHRDLKPENFLFATKDEYAAVKATDFGLSIFIDEGKVYREIVGSAYYVAPEVLKKNYGKEIDVWSAGIILYILLSGVPPFWAETETGIFKAILEGNLDLESAPWPSISATAKDLIRKMLNYDPEKRITAAEALEHPWMKEGGEASDKPLDNAVLIRMKQFSAMNKMKKLALKVIAENLSEEEIKGLRQMFNNMDTDRSGTITYEELKSGLTKLGSKLSEFEIRQLMDAADVDKSGTIDYQEFITATINRHKLEKEEHLFKAFQYFDKDNSGYITRDELRQALTEYQMADEATIDEVINDVDTDNDGKINYEEFVAMMRKGILDYDEKEKPR* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0670 528 ProSitePatterns EF-hand calcium-binding domain. 427 439 IPR018247 -
Apr9g0670 528 ProSitePatterns EF-hand calcium-binding domain. 498 510 IPR018247 -
Apr9g0670 528 ProSiteProfiles EF-hand calcium-binding domain profile. 378 413 IPR002048 GO:0005509
Apr9g0670 528 SUPERFAMILY Protein kinase-like (PK-like) 53 356 IPR011009 -
Apr9g0670 528 SMART serkin_6 73 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0670 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Apr9g0670 528 Gene3D Phosphorylase Kinase; domain 1 75 158 - -
Apr9g0670 528 Pfam Protein kinase domain 73 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0670 528 ProSitePatterns EF-hand calcium-binding domain. 391 403 IPR018247 -
Apr9g0670 528 ProSiteProfiles EF-hand calcium-binding domain profile. 486 520 IPR002048 GO:0005509
Apr9g0670 528 CDD STKc_CAMK 73 334 - -
Apr9g0670 528 MobiDBLite consensus disorder prediction 22 57 - -
Apr9g0670 528 Pfam EF-hand domain pair 383 443 IPR002048 GO:0005509
Apr9g0670 528 Pfam EF-hand domain pair 452 515 IPR002048 GO:0005509
Apr9g0670 528 SMART efh_1 454 482 IPR002048 GO:0005509
Apr9g0670 528 SMART efh_1 418 446 IPR002048 GO:0005509
Apr9g0670 528 SMART efh_1 489 517 IPR002048 GO:0005509
Apr9g0670 528 SMART efh_1 382 410 IPR002048 GO:0005509
Apr9g0670 528 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Apr9g0670 528 ProSiteProfiles EF-hand calcium-binding domain profile. 414 449 IPR002048 GO:0005509
Apr9g0670 528 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 38 521 - -
Apr9g0670 528 Gene3D Transferase(Phosphotransferase) domain 1 159 342 - -
Apr9g0670 528 MobiDBLite consensus disorder prediction 22 38 - -
Apr9g0670 528 SUPERFAMILY EF-hand 374 515 IPR011992 -
Apr9g0670 528 ProSiteProfiles Protein kinase domain profile. 73 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0670 528 ProSiteProfiles EF-hand calcium-binding domain profile. 450 485 IPR002048 GO:0005509
Apr9g0670 528 Gene3D - 343 518 - -
Apr9g0670 528 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 521 - -
Apr9g0670 528 ProSitePatterns EF-hand calcium-binding domain. 463 475 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0670 Apr-Chr9 10976133 10983692 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr9g0670 Pkinase 5.8e-75 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0670 9 10976133 10983692 Apr9g0670 9 10976133 10983692 ECH