Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0662 ATGGGCGAAGACGTGGAGATGAAAGATCAACCAACGCCCTCGCACTTTGTCTCTTCAGCTCCTTGCTCTACATTGCACCATTTGAAGGAGATAGCATCCATCATTGAAAATGGTTCATACTCAAAGGAAGTTCGTAGAATTGCTCGTGCCCTGCGCCTCACTTTTTCATTGAGGCGTAAACTGACAGCACCGCTTCTCTCATCTTTTCTCGACTACGTTCTTTCTCCTTCTTCTGAAGCTCACACTAGGTTATCCTCTTATCTTCCTAATGGCAAGGACGGTGATCAGGAGATGGAAGTAGACACTGCAGCATCTTCTATTCAAACTCCGACCAAGCACTTGTTGCCTGAGCTAGAAATATACTGTTACCTCCTCGTCCTGCTTTTTCTGATTGATCAGAAAAAGTACAATGAGGCCAAAGATTGTTCCTCGGCAAGCATTGTTCGGCTGAAGAGCCTGAATAGAAGAACTGTTGATGTTATTGCATCAAGATTGTACTTTTATTACTCGTATAGCTATGAGCTTACAGGGGATCTTGCTGAAATTCGGGGCAACCTACTTGCATTGCATCGGATTGCTACCCTGCGCCATGATGAGCTGGGTCAGGAAACACTTCTTAATCTGTTACTTCGGAACTATCTACACTACAACCTGTATGATCAGGCAGAGAAGTTGAGGTCTAAGGCTCCACGTTTTGAGGCACATTCAAACCAGCAGTTCTGTCGTTATATTTTCTACCTTGGCAAAATCCGGACAATTCAGCTTGAGTATACCGATGCCAAAGAGTCTCTCCTTCAGGCTGCTCGGAAAGCTCCTGTTGCAGCACAGGGTTTTCGAATTCAATGTAACAAGTGGGCTGTGATAGTGCGTTTATTATTGGGAGAAATACCTGAGAGGACTGTCTTTATGCAAAGAGGAATGGAAAAATCTTTGAGGCCTTACTTTGAGCTTACTAATGCTGTACGGATTGGTGACTTGGAGCTGTTTAGAAATGTTGCAGAGAAGTTTGCTACCACTTTCAATAGAGATCGAACACATAATTTGATTGTTCGGCTGCGTCATAATGTCATCAGGACTGGTTTACTCAACATCAGCATATCATATTCACGCATCTCATTATTGGGTGTAGCTAAAAAGTTGAGGTTGAACTCTGCAAATCCTGTTGCTGATGCTGAGAGCATCGTAGCAAAGGCTATTCGTGATGGGGCAATTGATGCTTCATTGGATCATGCAAATCGGTGGATGGTGTCTAAGGAAACTGGAGATATTTACTCTACAAATGAGCCTCAGATGGCCTTTAATTCTCGGATTGCCTTTTGTCTTAACATGCACAATGAGGCCGTTCGAGCACTGCGATTTCCACCAAACACACACAAGGAAAAGGAAAGTGCTGAGAAGAGGAGAGAGAGGCAACAACAAGAGCAAGAACTGGCTAAGCATATCGCAGAGGAAGATGATGATGATTTCTGA 1470 0.4381 MGEDVEMKDQPTPSHFVSSAPCSTLHHLKEIASIIENGSYSKEVRRIARALRLTFSLRRKLTAPLLSSFLDYVLSPSSEAHTRLSSYLPNGKDGDQEMEVDTAASSIQTPTKHLLPELEIYCYLLVLLFLIDQKKYNEAKDCSSASIVRLKSLNRRTVDVIASRLYFYYSYSYELTGDLAEIRGNLLALHRIATLRHDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRYIFYLGKIRTIQLEYTDAKESLLQAARKAPVAAQGFRIQCNKWAVIVRLLLGEIPERTVFMQRGMEKSLRPYFELTNAVRIGDLELFRNVAEKFATTFNRDRTHNLIVRLRHNVIRTGLLNISISYSRISLLGVAKKLRLNSANPVADAESIVAKAIRDGAIDASLDHANRWMVSKETGDIYSTNEPQMAFNSRIAFCLNMHNEAVRALRFPPNTHKEKESAEKRRERQQQEQELAKHIAEEDDDDF* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0662 489 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3 1 489 - -
Apr9g0662 489 Gene3D - 244 419 - -
Apr9g0662 489 Pfam Proteasome regulatory subunit C-terminal 422 488 IPR013586 GO:0000502|GO:0030234|GO:0042176
Apr9g0662 489 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 1 489 - -
Apr9g0662 489 SUPERFAMILY "Winged helix" DNA-binding domain 348 423 IPR036390 -
Apr9g0662 489 SMART PINT_4 347 440 IPR000717 -
Apr9g0662 489 Coils Coil 456 483 - -
Apr9g0662 489 MobiDBLite consensus disorder prediction 454 482 - -
Apr9g0662 489 Pfam PCI domain 313 418 IPR000717 -
Apr9g0662 489 ProSiteProfiles PCI domain profile. 241 422 IPR000717 -
Apr9g0662 489 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 347 440 - -
Apr9g0662 489 MobiDBLite consensus disorder prediction 454 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0662 Apr-Chr9 10794885 10798158 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0662 9 10794885 10798158 Apr9g0662 9 10794885 10798158 ECH
Apr9g0662 9 10794885 10798158 Apr5g1680 5 20348560 20353381 PCT