Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0627 ATGGCTCTCCTAACTTCCTTGCCTCAACACTCCGATCCCAAGAGCAAAAACAAGCGTAAGCAGCAGCAACAGAAGAAGCAGCAAAAACAGAAACAACCCTCTTCATGGGACCAAATCAAAAACATCATCACCTGCAAACAGATCGAAGGGTTCAGAGTGCATGACCCTTCCAAATACTCCAAGCTAGGCTCTTCTTGCAGCTCCATATGCAGCTTCAGAGATGTTGTTCATGGGAACACGCGAGTTGTACACAGGTCTGATAACTCCTCACCTGAGAGTAGCACACTGGGTCAAGAAACTGGCTTGCTCAGTAGGAAACCGGTCACTGCAACCTCATCAGCAAGCTCTGTGTCTGGTTCTGCCAAATCCAACGGTGGAGCAACCTCCACGTCATCAACTTCCAGAGGAATGCAATTTAGAAAACTATCTGGGTGTTATGAGTGTCACATGATTATTGATCCTAGCAGGTTACCAATTTCAAGGAGCAGTGTGTGTACTTGCTCTCAGTGTGGTGAAGTCTTCCCTAAGATGGAAAGCTTGGAGCTTCATCAAGCTGTTCGTCATGCTGTTTCGGAGCTGGGTCCGGAGGATTCGGGTCGGAACATAGTGGAAATCATATTCAAATCGAGCTGGTTGAAGAAGGACAACCCGATATGCAAGATCGAACGGATACTAAAAGTGCACAACACCGAACGCACCATCCAACGGTTTGAGGAGTGCAGGGACACCATAAAGAACCGTGCGCAGAACAGCAGCAAGAAAAACCCCAGGTGCGCAGCAGACGGCAACGAACTGTTGCGGTTCCACTGCACCACCTTGACGTGCGCACTTGGCGCACGTGGGTCCTCCGCCTTGTGCGCCGCCGTACCTGGCTGCGGAGTGTGCACGATCATCAGGCACGGTTTTCAAGGGAAGATTGGCGGCGAGTGCAAGGTGAAGGGCGTGAGAACCACCGCCAGCAGCGGTAGGGCCCACGACTCGGTGGTGTGCGGTGAGGGCACCAGAAGGGCCATGCTTGTGTGTCGCGTGATTGCGGGGAGGGTGAAGCGCGTGGCAGAAGACGCGCTGTCGGATGAGGAAAATCTATCAGTTGCGTCATTCGATTCCGTAGCTGGCCACGCTGGAATCTACTCGAATCTCGAGGAATTGGTTGTTTTCAACTCAAGGGCTATCCTTCCTTGTTTCGTGGTGATTTATAAGGTTCTTTCGGTTCTGCCATGCACACGCATGACGCATGACCCAACCATGATGATGGAAGGTGGAGGTGGAACCCAGTTTGATGTCAACCTTGTGAATATCCTTGTCACTGCTTAA 1314 0.5137 MALLTSLPQHSDPKSKNKRKQQQQKKQQKQKQPSSWDQIKNIITCKQIEGFRVHDPSKYSKLGSSCSSICSFRDVVHGNTRVVHRSDNSSPESSTLGQETGLLSRKPVTATSSASSVSGSAKSNGGATSTSSTSRGMQFRKLSGCYECHMIIDPSRLPISRSSVCTCSQCGEVFPKMESLELHQAVRHAVSELGPEDSGRNIVEIIFKSSWLKKDNPICKIERILKVHNTERTIQRFEECRDTIKNRAQNSSKKNPRCAADGNELLRFHCTTLTCALGARGSSALCAAVPGCGVCTIIRHGFQGKIGGECKVKGVRTTASSGRAHDSVVCGEGTRRAMLVCRVIAGRVKRVAEDALSDEENLSVASFDSVAGHAGIYSNLEELVVFNSRAILPCFVVIYKVLSVLPCTRMTHDPTMMMEGGGGTQFDVNLVNILVTA* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0627 437 ProSiteProfiles Zinc finger C2H2 type domain profile. 165 193 IPR013087 -
Apr9g0627 437 PANTHER BNAC02G23540D PROTEIN 20 402 - -
Apr9g0627 437 MobiDBLite consensus disorder prediction 83 135 - -
Apr9g0627 437 SUPERFAMILY ADP-ribosylation 190 400 - -
Apr9g0627 437 MobiDBLite consensus disorder prediction 1 38 - -
Apr9g0627 437 ProSitePatterns Zinc finger C2H2 type domain signature. 165 188 IPR013087 -
Apr9g0627 437 Gene3D - 189 401 - -
Apr9g0627 437 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 20 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0627 Apr-Chr9 10069545 10072662 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Apr9g0627 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0627 9 10069545 10072662 Apr9g0627 9 10069545 10072662 ECH