Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0566 ATGGCTTCCGTAGAAGAAAAGATTAAAACTGTTGGAGTTGGAGGAGGACTTCTTGTTGGGGGTCAGACTCTAGTTGCTGAGATGAAACTGCTGAAAGAAATGCAGGAACATTCTGGCGTCCGAAAGACTTTGAATTCAGAGTTATGGCATGCTTGTGCAGGCCCTCTTGTATCCTTGCCTCAGGTTGGAAGTCTTGTGTTTTACTTCCCTCAGGGACATAGTGAGCAGGTGGCAGCTTCTACTAGAAGAACAGCAACCTCGCAGATTCCAAATTATCCCAATCTTCCATCTCAGTTGCTGTGTCAAGTACAAAATGTCACACTTCATGCAGACAAGGAGACTGATGAAATCTATGCTCAAATGACTCTACAACCACTGAATTCTGAAAAAGAAGTATTTCCTATATCTGATTTTGGGCTAAAGCATAGTAAACATCCCAGTGAGTTCTTCTGCAAAACATTGACGGCTAGTGACACAAGCACGCATGGTGGCTTTTCGGTTCCACGTAGGGCTGCAGAGAAGCTCTTTCCTCCATTGGATTACACAATTCAACCTCCAACACAAGAACTTGTTGTCCGAGATTTGCATGATAATACTTGGACATTTCGGCATATATACCGGGGTCAACCAAAGCGACACCTTCTCACAACAGGATGGAGTTTGTTTGTAGGCTCAAAAAGGCTTAGAGCTGGTGATTCTGTTCTTTTTATCAGGGATGAGAAATCACAATTACGAGTTGGTGTGAGGCGTGTTAATCGGCAACAGACAACACTTCCATCGTCAGTACTTTCTGCAGATAGCATGCACATTGGTGTTCTTGCTGCTGCAGCTCATGCTGCTGCTAATCGAAGTCCATTCACTATTTTCTACAATCCTAGGGCATGTCCTTCAGAATTTGTTATTCCGCTGGCTAAATACAGAAAAGCTGTATTTGGGACTCACGTCTCAGTTGGCATGAGATTTGGGATGATGTTTGAGACAGAAGAATCGGGTAAGCGCAGATATATGGGTACAATTGTTGGCATCAGTGATGTGGATCCTTTGAGGTGGCCAGGTTCTAAGTGGCGAAACATTCAGGTGGAGTGGGATGAACCAGGGTGTGGTGATAAGCAGAATAGAGTTAGTGTATGGGAGATTGAGACTCCTGAAAGCCTTTTTATCTTTCCTTCTTTGACTTCAAGTCTAAAACGGCCATTACAATCTGGACTTTTGGAAAATGAGTGGGGAACTTTGTTAAGAAGACCTTTTATAAGAGTTCCTGAAAATGGGACAATGGAGCTCTCAAACTCAATACCAAATCTCTACTCCGAACACCTGATGAAAATGCTTTTAAAACCTCAGCTTATTAACAATAATGGAGCATTTTTATCTGTCATGCAACAAGAATCTGCTGCTATGAGAGCTCCCTTGCAAGAGATGATGAAGACCACACTAGCAACACACACCCAAAAAGTTCATCTTGCATGCACAGAGAACACGTCACTGAAAAATCTACATTCTCAGTCTATTCCTGACCAACCTAATGCCTTAAACATGCAATCACTGTTGAAAAGTGATCAACCTGAAAAGTTGCAGCCTCTGCCTATAGGAACAGTTACTGATAAGTCAAAAATAGAATCTGAAGTGTTACCTGATCATATGATTGACTACCCTTCCGTGGAAGGCTGCAACATTGAAAAAGTGGCAGCAAATCCTGTTAACCAACAAGGCCTAGCAAGTCAATTGACATTCCATAATCAAAACCAGAATCCATTACTCACTCAATCTAATCCATGGCCTATGCAACCTCAGTTAGAGTCATCCATACCACATCCTCAACTGATTGATGTGGGCCAAGCTGATTCTGCTATTGTAAATGGCCTACTTCCTCAGCTAGAAATTGATGAATGGATGGTGTATGCTTCTTCCCAACCTTTTGCTGGGCAAAACAGATCAACTTTGCCTTTGTCAGACTTGCAAGAACATAGCTCACTTCAACCTCAAGCAGTGAATCCCTCTTTAACTTCAGTGAACCAAGAAGTGTGGGATCATTATGTCAAGAATTTGAAGTTTTTATCTCAATCAGATCAGCTAACATCAGTCTGTCAGCCGGGGTTGTATGGCCTCAATGGCATGTCTAGTTCAAACAATTTGAGGGATCTCTCAGCTGAGAGCAACAACCAAAGTGAGATTTGTGTCAATGTTGATGTTAGCAACAGTGTAAGTACTACCATGGTTGATCCTTCTACTTCAAGCACCATTTTGGATGAGTTGTGCACAATGAAAGACAGAGAATTTCAGAATCCACAAGATTGCATGGTGGGCAACTTGAGCTCAAGTCAGGATGTCCAGTCTCAGATAACCTCAGCAAGTCTAGCAGAGTCACATGCCTTTCCGCTGAGAGACATCGCTGACAACTCAGGTGGTACTTCTTCAAGCCATGTTGATTTTGATGAAAGCAGCTTTCTACAGAATAACTCATGGCAGCAAGTACCTGCACCAATTCGAACCTACACAAAGGTGCAAAAGGCAGGTTCTGTAGGAAGATCAATTGATGTCACCACTTTCAAGAACTATGAGGAGTTGATCCGTGCAATTGAATGCATGTTTGGACTTGATGGTTTGCTGAATGACACTAAAGGTTCAGGATGGAAATTGGTATATGTAGATTATGAGAATGATGTTCTACTTGTCGGGGATGATCCTTGGGAGGAATTTGTGGGCTGTGTTCGCTGCATCAGAATTCTATCACCTTCAGAAGTTCAGCAGATGAGTGAAGAGGGGATGAAGCTTCTAAACAGTGGAGCTTTGCAAGGGATCAATGTTTGA 2808 0.4259 MASVEEKIKTVGVGGGLLVGGQTLVAEMKLLKEMQEHSGVRKTLNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPSQLLCQVQNVTLHADKETDEIYAQMTLQPLNSEKEVFPISDFGLKHSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVFGTHVSVGMRFGMMFETEESGKRRYMGTIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIETPESLFIFPSLTSSLKRPLQSGLLENEWGTLLRRPFIRVPENGTMELSNSIPNLYSEHLMKMLLKPQLINNNGAFLSVMQQESAAMRAPLQEMMKTTLATHTQKVHLACTENTSLKNLHSQSIPDQPNALNMQSLLKSDQPEKLQPLPIGTVTDKSKIESEVLPDHMIDYPSVEGCNIEKVAANPVNQQGLASQLTFHNQNQNPLLTQSNPWPMQPQLESSIPHPQLIDVGQADSAIVNGLLPQLEIDEWMVYASSQPFAGQNRSTLPLSDLQEHSSLQPQAVNPSLTSVNQEVWDHYVKNLKFLSQSDQLTSVCQPGLYGLNGMSSSNNLRDLSAESNNQSEICVNVDVSNSVSTTMVDPSTSSTILDELCTMKDREFQNPQDCMVGNLSSSQDVQSQITSASLAESHAFPLRDIADNSGGTSSSHVDFDESSFLQNNSWQQVPAPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYENDVLLVGDDPWEEFVGCVRCIRILSPSEVQQMSEEGMKLLNSGALQGINV* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0566 935 CDD B3_DNA 149 250 IPR003340 GO:0003677
Apr9g0566 935 PANTHER AUXIN RESPONSE FACTOR 5 31 933 - -
Apr9g0566 935 SMART B3_2 150 252 IPR003340 GO:0003677
Apr9g0566 935 Pfam B3 DNA binding domain 150 251 IPR003340 GO:0003677
Apr9g0566 935 Gene3D - 148 251 IPR015300 -
Apr9g0566 935 SUPERFAMILY DNA-binding pseudobarrel domain 138 279 IPR015300 -
Apr9g0566 935 Pfam AUX/IAA family 826 916 IPR033389 -
Apr9g0566 935 ProSiteProfiles PB1 domain profile. 829 913 IPR000270 GO:0005515
Apr9g0566 935 Gene3D - 314 386 - -
Apr9g0566 935 ProSiteProfiles B3 DNA-binding domain profile. 150 252 IPR003340 GO:0003677
Apr9g0566 935 SUPERFAMILY CAD & PB1 domains 831 908 - -
Apr9g0566 935 Gene3D - 826 918 - -
Apr9g0566 935 Pfam Auxin response factor 276 359 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Apr9g0566 935 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 31 933 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0566 Apr-Chr9 7997362 8002674 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Apr9g0566 AUX_IAA 5.9e-11 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0566 9 7997362 8002674 Apr9g0566 9 7997362 8002674 ECH